Gene EcSMS35_3281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3281 
SymbolhybB 
ID6144333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3358311 
End bp3359489 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content54% 
IMG OID641618111 
Productputative hydrogenase 2 b cytochrome subunit 
Protein accessionYP_001745261 
Protein GI170680419 
COG category[C] Energy production and conversion 
COG ID[COG5557] Polysulphide reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATG ATCCACAACC GCTGGGCGGC AAAATCATCA GTAAACCGGT CATGATTTTT 
GGACCGTTAA TCGTCATCTG TATGCTCCTG ATTGTGAAGC GTCTGGTGTT CGGTCTGGGC
TCAGTCTCTG ACCTGAACGG CGGCTTCCCG TGGGGCGTGT GGATCGCGTT TGACCTGCTG
ATCGGCACCG GCTTTGCCTG TGGCGGCTGG GCGCTGGCGT GGGCGGTATA CGTCTTTAAC
CGTGGGCAAT ACCATCCGCT GGTGCGTCCG GCGCTGTTGG CGAGTCTGTT TGGTTACTCA
CTGGGTGGCT TGTCGATCAC TATTGACGTG GGTCGCTACT GGAACCTGCC GTACTTCTAC
ATTCCGGGTC ACTTCAACGT GAACTCGGTA CTGTTCGAGA CGGCGGTCTG TATGACCATC
TACATCGGCG TGATGGCACT GGAGTTTGCT CCAGCACTGT TTGAACGTCT GGGCTGGAAG
GTGTCGCTAC AGCGTCTGAA CAAGGTTATG TTCTTCATCA TTGCACTTGG CGCGCTGCTG
CCGACCATGC ACCAGTCTTC AATGGGGTCG CTGATGATCT CGGCGGGCTA CAAGGTGCAT
CCGTTGTGGC AGAGCTATGA AATGTTGCCG TTGTTCTCGC TGCTGACGGC GTTCATCATG
GGCTTCTCGA TTGTCATCTT TGAAGGTTCG CTGGTGCAGG CGGGTCTGCG TGGCAACGGT
CCGGATGAAA AGAGTCTGTT CGTTAAGCTG ACCAACACCA TCAGTGTGTT GCTGGCGATT
TTCATCGTGC TGCGCTTTGG CGAGCTTATC TATCGCGACA AGCTGTCGTT AGCGTTTGCC
GGTGACTTCT ATTCCGTGAT GTTCTGGATT GAAGTCCTGC TGATGCTCTT CCCGCTGGTC
GTTCTGCGTG TGGCGAAGCT GCGTAATGAT TCCCGCATGC TGTTCCTGTC AGCACTGAGC
GCGCTGTTAG GTTGTGCAAC CTGGCGTCTG ACCTATTCGC TGGTGGCATT CAACCCGGGT
GGCGGTTACG CCTACTTCCC GACCTGGGAA GAACTGTTGA TTTCTATTGG TTTTGTGGCT
ATTGAGATTT GCGCTTACAT CGTACTCATT CGTCTACTGC CGATACTTCC TCCTTTAAAA
CAAAACGATC ATAATCGTCA TGAGGCGAGC AAAGCATGA
 
Protein sequence
MSHDPQPLGG KIISKPVMIF GPLIVICMLL IVKRLVFGLG SVSDLNGGFP WGVWIAFDLL 
IGTGFACGGW ALAWAVYVFN RGQYHPLVRP ALLASLFGYS LGGLSITIDV GRYWNLPYFY
IPGHFNVNSV LFETAVCMTI YIGVMALEFA PALFERLGWK VSLQRLNKVM FFIIALGALL
PTMHQSSMGS LMISAGYKVH PLWQSYEMLP LFSLLTAFIM GFSIVIFEGS LVQAGLRGNG
PDEKSLFVKL TNTISVLLAI FIVLRFGELI YRDKLSLAFA GDFYSVMFWI EVLLMLFPLV
VLRVAKLRND SRMLFLSALS ALLGCATWRL TYSLVAFNPG GGYAYFPTWE ELLISIGFVA
IEICAYIVLI RLLPILPPLK QNDHNRHEAS KA