| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3257 |
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| Symbol | glcD |
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| ID | 6146214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3334633 |
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| End bp | 3336123 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641618087 |
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| Product | glycolate oxidase subunit GlcD |
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| Protein accession | YP_001745237 |
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| Protein GI | 170682557 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTACGAAG AGCGTCTTGA TGGCGCTTTA CCCGATGTCG ACCGCACATC GGTACTGATG
GCACTGCGTG AGCATGTCCC TGGACTGGAG ATCCTGCATA CCGATGAGGA GATCATTCCT
TACGAGTGTG ACGGGTTGAG CGCGTATCGC ACGCGTCCAT TACTGGTTGT TCTGCCTAAG
CAGATGGAAC AGGTGACGGC GATTCTGGCT GTCTGCCACC GCCTGCGTGT ACCGGTGGTG
ACCCGTGGTG CAGGCACCGG GCTTTCTGGT GGCGCGCTGC CGCTGGAAAA AGGTGTGTTG
TTGGTGATGG CGCGCTTTAA AGAGATCCTC GACATTAACC CCGTTGGTCG CCGTGCGCGC
GTGCAGCCGG GCGTGCGTAA CCTGGCGATC TCCCAGGCCG TTGCGCCGCA TAATCTCTAT
TACGCGCCGG ATCCGTCCTC ACAAATCGCC TGTTCGATTG GCGGCAATGT GGCGGAAAAT
GCCGGTGGCG TTCACTGCCT GAAATATGGT CTAACCGTAC ATAACCTGCT GAAAATTGAA
GTGCAAACGC TGGACGGCGA GGCGCTGACG CTGGGATCGG ACGCGCTGGA TTCGCCTGGT
TTTGACCTGC TGGCGCTGTT TACCGGATCG GAAGGTATGC TCGGCGTGAC CACCGAAGTG
ACGGTAAAAC TGCTGCCGAA GCCGCCCGTG GCGCGGGTGC TGTTAGCCAG CTTTGACTCG
GTAGAAAAAG CCGGACTTGC GGTTGGTGAC ATCATCGCCA ATGGCATTAT CCCCGGCGGG
CTGGAGATGA TGGATAACCT GTCGATTCGC GCGGCGGAAG ATTTTATTCA TGCCGGTTAT
CCCGTCGATG CCGAAGCGAT TTTGTTATGC GAACTGGACG GCGTGGAGTC TGACGTACAG
GAAGACTGCG AGCAGGTTAA CGACATCTTG TTGAACGCGG GTGCGACTGA CGTCCGTCTG
GCACAGGACG AAGCAGAGCG AGTACGTTTC TGGGCCGGTC GCAAAAATGC GTTCCCGGCG
GTAGGACGTA TCTCCCCGGA TTACTACTGC ATGGATGGCA CCATCCCGCG CCGCGCCCTG
CCTGGCGTAC TGGAAGGCAT TGCCCGTTTA TCGCAGCAAT ATGATTTACG CGTTGCCAAC
GTCTTTCATG CCGGAGACGG CAACATGCAC CCGTTAATCC TTTTCGATGC CAACGAACCC
GGTGAATTTG CCCGCGCGGA AGAGCTGGGC GGGAAGATCC TCGAACTCTG CGTTGAAGTT
GGCGGCAGCA TCAGTGGGGA ACATGGCATT GGGCGCGAAA AAATCAATCA AATGTGCGCC
CAGTTCAACA GCGATGAAAT CACGACCTTC CATGCGGTCA AGGCGGCGTT TGACCCCGAT
GGTTTGCTGA ACCCAGGAAA AAACATTCCC ACGCTACACC GCTGTGCTGA ATTTGGTGCC
ATGCATGTGC ATCACGGTCA TTTACCTTTT CCTGAACTGG AGCGTTTCTG A
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| Protein sequence | MYEERLDGAL PDVDRTSVLM ALREHVPGLE ILHTDEEIIP YECDGLSAYR TRPLLVVLPK
QMEQVTAILA VCHRLRVPVV TRGAGTGLSG GALPLEKGVL LVMARFKEIL DINPVGRRAR
VQPGVRNLAI SQAVAPHNLY YAPDPSSQIA CSIGGNVAEN AGGVHCLKYG LTVHNLLKIE
VQTLDGEALT LGSDALDSPG FDLLALFTGS EGMLGVTTEV TVKLLPKPPV ARVLLASFDS
VEKAGLAVGD IIANGIIPGG LEMMDNLSIR AAEDFIHAGY PVDAEAILLC ELDGVESDVQ
EDCEQVNDIL LNAGATDVRL AQDEAERVRF WAGRKNAFPA VGRISPDYYC MDGTIPRRAL
PGVLEGIARL SQQYDLRVAN VFHAGDGNMH PLILFDANEP GEFARAEELG GKILELCVEV
GGSISGEHGI GREKINQMCA QFNSDEITTF HAVKAAFDPD GLLNPGKNIP TLHRCAEFGA
MHVHHGHLPF PELERF
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