| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3255 |
|---|
| Symbol | glcF |
|---|
| ID | 6145300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3332347 |
|---|
| End bp | 3333570 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641618085 |
|---|
| Product | glycolate oxidase iron-sulfur subunit |
|---|
| Protein accession | YP_001745235 |
|---|
| Protein GI | 170680842 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCC AATTAACCGA AGAGATGCGG CAGAACGCGC GGGCGCTGGA AGCCGACAGC
ATCCTGCGCG CCTGTGTTCA CTGCGGATTT TGTACCGCAA CCTGCCCAAC CTATCAGCTC
CTGGGCGATG AACTGGACGG GCCGCGCGGG CGCATCTATC TGATTAAACA GGTGCTGGAA
GGCAACGAAG TCACGCTTAA AACACAGGAG CATCTCGATC GCTGTCTCAC TTGCCGCAAT
TGTGAAACCA CCTGTCCTTC TGGTGTGCGC TATCACAATT TGCTGGATAT CGGGCGTGAT
ATTGTCGAGC AGAAAGTGAA ACGCCCATTG CCGGAGCGAA TGCTGCGCGA AGGATTGCGC
CAGGTAGTGC CGCGTCCGGC GGTCTTCCGT GCGCTGACGC AGGTAGGACT GGTGCTGCGA
CCGTTTCTGC CGGAACAGGT CAGAGCAAAA CTGCCCGCCG AAACGGTGAA AGCTAAACCG
CGACCACCGC TGCGCCATAA GCGTCGGGTT TTAATGCTGG AAGGCTGCGC CCAGCCTACG
CTTTCGCCCA ACACCAACGC GGCAACTGCG CGAGTGCTGG ATCGTCTGGG GATCAGCGTC
ATGTCAGCTA ACGAAGCAGG CTGTTGTGGC GCGGTGGACT ATCATCTTAA TGCGCAGGAG
AAAGGGCTGG CACGGGCGCG CAATAATATT GATGCCTGGT GGCCCGCGAT TGAAGCAGGT
GCCGAGGCAA TTTTGCAAAC CGCCAGCGGT TGCGGCGCGT TTGTCAAAGA GTACGGGCAG
ATGCTGAAAA ACGATGCGTT ATATGCCGAT AAAGCGCGTC AAGTCAGTGA ACTGGCGGTC
GATTTAGTCG AGCTTCTGCG CGAGGAACCG CTGGAAAAAC TGGCAATTCG CGGCGATAAA
AAACTGGCCT TCCACTGCCC GTGTACCCTA CAACATGCGC AAAAGCTGAA CGGCGAAGTG
GAAAAAGTGT TGCTTCGTCT TGGATTTACC TTAACGGACG TTCCCGACAG CCATCTGTGC
TGCGGTTCAG CGGGAACATA TGCGTTAACG CATCCCGATC TGGCACGCCA GCTGCGGGAA
AACAAAATGA ATGCGCTGGA AAGCGGCAAA CCGGAAATGA TCGTCACCGC CAACATTGGT
TGCCAGACCC ATCTGGCGAG CGCCGGTCGT ACCTCTGTGC GTCACTGGAT TGAAATTGTA
GAACAAGCCC TTGAAAAGGA ATAA
|
|---|
| Protein sequence | MQTQLTEEMR QNARALEADS ILRACVHCGF CTATCPTYQL LGDELDGPRG RIYLIKQVLE
GNEVTLKTQE HLDRCLTCRN CETTCPSGVR YHNLLDIGRD IVEQKVKRPL PERMLREGLR
QVVPRPAVFR ALTQVGLVLR PFLPEQVRAK LPAETVKAKP RPPLRHKRRV LMLEGCAQPT
LSPNTNAATA RVLDRLGISV MSANEAGCCG AVDYHLNAQE KGLARARNNI DAWWPAIEAG
AEAILQTASG CGAFVKEYGQ MLKNDALYAD KARQVSELAV DLVELLREEP LEKLAIRGDK
KLAFHCPCTL QHAQKLNGEV EKVLLRLGFT LTDVPDSHLC CGSAGTYALT HPDLARQLRE
NKMNALESGK PEMIVTANIG CQTHLASAGR TSVRHWIEIV EQALEKE
|
|---|
| |