| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3239 |
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| Symbol | gspL |
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| ID | 6147096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3311240 |
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| End bp | 3312418 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641618069 |
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| Product | GspL-like protein |
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| Protein accession | YP_001745219 |
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| Protein GI | 170683391 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.139825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.775494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCCA TGCTTGAGAT TTATTTCCCG CTTTGCGCCG CTGATCCCAT CCGTTGGCAG
CGCCGTACAC CCGACGTGGA GCACGGCATC TGGCCTGACG TCGCCGACGA ATATCTCCAG
CAATGGCTGC AAACAGACAC AATTCGACTC TATATTCCCG GCGAATGGAT CAGCGTCTGG
CAGGTTGAAC TGCCTGATGT GCCTCGCAAG CAGATACCGA CGATTCTGCC CGCCTTGCTG
GAAGAAGAGC TGAACCAGGA TATCGATGAA CTGCATTTCG CCCCGTTGAA AATCGACCAG
CAACTGGCAA CCGTAGCTGT GATTCACCAG CAGCATATGC GCAACATTGC GCAGTGGTTG
CAGGCAAACG GCATCACCCG CGCTACCGTC GCGCCAGACT GGATGTCCAT TCCTTGTGGC
TATATGGCTG GCGATGCGCA ACGGGTTATC TGCCGCATCG ATGAATGCCG GGGATGGAGC
GCCGGGCGGG CGCTGGCTCC GGTCATGTTC CGCGCACAGC TCAATGAGCA GGATATACCG
CTTTCACTAA CCGTGGTCGG CATTGCACCG GAAGAACTGT CTGCATGGGC TGGTGCGGAC
GCCGAACGCC TGACCGTTAC GACTCTGCCA GCCATTACCA CTTATGGCGA ATCGGAAGGG
AACCTGCTAA CAGGGCCGTG GCAGCCTCGT GTCAGCTACC GAAAACAGTG GGCGCGCTGG
CGGGTGATGA TTCTGCCGAT ATTGCTGATT CTGGTTGCGC TGGTAGTGGA ACGGGGCGTG
ACGTTATGGA GCGTCAGCGA ACAGGTGGCG CAAAGCCGCA CCCAGGCGGA GAAACAGTTC
TTAACGCTAT TCCCAGAGCA GAAGCGGATT GTGAATTTAC GCTCTCAGGT GACGATGGCG
CTGAAAAAAT ATCGCCCACA GGCCGACGAT ACCCGGCTGC TCGCAGAATT GTCAGCGATC
GCCAGTACCC TGAAATCAGC GTCACTTACC GACATCGAAA TGCGTGGTTT CACCTTTGAT
CAAAAACGCC AGACGCTTCA CCTCCAACTG CGGGCTGCGA ACTTTGCCAG CTTCGACAAA
CTGCGTAGCG CACTGGCAAC CGATTATGTT GTGCAACAGG ACGCGTTACA GAAAGAGGGT
GATGCGGTTT CCGGCGGCGT AACGTTGCGG AGGAAATAA
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| Protein sequence | MSSMLEIYFP LCAADPIRWQ RRTPDVEHGI WPDVADEYLQ QWLQTDTIRL YIPGEWISVW
QVELPDVPRK QIPTILPALL EEELNQDIDE LHFAPLKIDQ QLATVAVIHQ QHMRNIAQWL
QANGITRATV APDWMSIPCG YMAGDAQRVI CRIDECRGWS AGRALAPVMF RAQLNEQDIP
LSLTVVGIAP EELSAWAGAD AERLTVTTLP AITTYGESEG NLLTGPWQPR VSYRKQWARW
RVMILPILLI LVALVVERGV TLWSVSEQVA QSRTQAEKQF LTLFPEQKRI VNLRSQVTMA
LKKYRPQADD TRLLAELSAI ASTLKSASLT DIEMRGFTFD QKRQTLHLQL RAANFASFDK
LRSALATDYV VQQDALQKEG DAVSGGVTLR RK
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