| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3237 |
|---|
| Symbol | |
|---|
| ID | 6146592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3310058 |
|---|
| End bp | 3310462 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641618067 |
|---|
| Product | IS200 transposase orfA |
|---|
| Protein accession | YP_001745217 |
|---|
| Protein GI | 170683194 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.282836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT ATAAAATCAA TCGTTCAAGA CATGCAGCCT TCCTTTTGCA TGTTCATCTT
GTCTTTGTAA CAAAATACCG TCGAAAGATA CTGGGAGAGT TACACTGTGC AGCATTCCAT
CAGTATGCAG CAGAAGTCTG CCGTGATTTT GGGGCAGAAC TAAAAGAAAG TAACGGAGAC
GTAGATCATG TTCACATGCT GATCGAATAC CCACCAACAG TGCAGCTTTC GGTACTGGTT
AACTCACTGA AAGCAGTGAC ATCCCGCCGT CTGCGAAACG AATTTCTTGA TTTGCGGGGG
GCATACGGAA AAGCCGTGCT CTGGTCGAGG TCATACTTTG CTGGCTCCTG CGGAGGTGCG
CCGCTGGAAG TTGTGAAGCA ATACATTCAA CATCAGCGTG GCTGA
|
|---|
| Protein sequence | MQKYKINRSR HAAFLLHVHL VFVTKYRRKI LGELHCAAFH QYAAEVCRDF GAELKESNGD
VDHVHMLIEY PPTVQLSVLV NSLKAVTSRR LRNEFLDLRG AYGKAVLWSR SYFAGSCGGA
PLEVVKQYIQ HQRG
|
|---|
| |