| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3235 |
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| Symbol | kpsM |
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| ID | 6144510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3306990 |
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| End bp | 3307766 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641618065 |
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| Product | polysialic acid capsule biosynthesis transport protein KpsM |
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| Protein accession | YP_001745215 |
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| Protein GI | 170681020 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.586026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.693263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGAA GTGGATTTGA AGTCCAGAAA GTCACCGTAG AGGCATTATT TCTACGAGAA
ATACGAACAC GCTTTGGTAA GTTCCGTCTG GGATATTTGT GGGCGATTCT CGAACCCTCC
GCGCATTTGC TGATACTGTT GGGAATTTTG GGTTACGTTA TGCACCGCAC TATGCCAGAC
ATCTCGTTCC CGGTGTTTTT ACTTAATGGC CTGATTCCCT TTTTTATCTT TAGTAGTATT
AGCAAACGTT CTATTGGTGC TATTGAAGCG AACCAGGGGC TGTTTAATTA TCGACCAGTA
AAACCCATCG ATACGATCAT TGCACGTGCA CTGCTTGAGA CACTGATTTA CGTTGCTGTT
TATATTTTGC TCATGCTTAT CGTCTGGATG ACAGGCGAAT ATTTCGAAAT TACAAACTTT
TTACAACTTG TGCTCACCTG GAGTTTGTTA ATCATTCTTT CATGTGGCGT CGGCTTAATA
TTTATGGTCG TTGGTAAAAC CTTTCCTGAA ATGCAAAAGG TCCTGCCGAT ACTGCTTAAG
CCGCTGTATT TCATCTCCTG CATCATGTTC CCTCTACACT CGATTCCAAA GCAATACTGG
TCATATCTAC TCTGGAACCC ATTAGTGCAT GTTGTGGAGT TAAGCCGCGA GGCAGTTATG
CCTGGCTATA TCAGTGAAGG CGTGAGTCTG AACTACCTTG CAATGTTTAC TCTGGTCACC
CTGTTCATCG GCCTAGCATT ATACCGAACG CGTGAAGAGG CAATGCTGAC ATCATGA
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| Protein sequence | MARSGFEVQK VTVEALFLRE IRTRFGKFRL GYLWAILEPS AHLLILLGIL GYVMHRTMPD
ISFPVFLLNG LIPFFIFSSI SKRSIGAIEA NQGLFNYRPV KPIDTIIARA LLETLIYVAV
YILLMLIVWM TGEYFEITNF LQLVLTWSLL IILSCGVGLI FMVVGKTFPE MQKVLPILLK
PLYFISCIMF PLHSIPKQYW SYLLWNPLVH VVELSREAVM PGYISEGVSL NYLAMFTLVT
LFIGLALYRT REEAMLTS
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