| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3234 |
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| Symbol | kpsT |
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| ID | 6143906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3306334 |
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| End bp | 3306993 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641618064 |
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| Product | polysialic acid capsule biosynthesis transport protein KpsT |
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| Protein accession | YP_001745214 |
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| Protein GI | 170680342 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.953201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAAGA TTGAGAATTT GACGAAGTCT TATCGCACGC CCACTGGGCG GCATTATGTT
TTTAAAAATT TGAATATTAT TTTTCCTAAA GGCTATAACA TTGCCCTGAT TGGTCAAAAT
GGAGCCGGTA AATCAACTTT ACTTCGGATA ATTGGTGGTA TAGATCGTCC TGATAGTGGG
AACATTATTA CAGAACATAA AATTTCATGG CCCGTTGGAT TGGCTGGTGG ATTTCAAGGA
AGTTTAACCG GTCGTGAAAA TGTTAAATTT GTTGCCCGAC TATATGCAAA ACGCGATGAG
TTAAATGAGA GGGTTGATTT TGTTGAAGAG TTTTCCGAAC TCGGAAAATA TTTCGATATG
CCCATTAAAA CTTATTCTTC TGGCATGAGG TCAAGGTTAG CTTTTGGATT AAGTATGGCT
TTTAAATTCG ACTATTATCT TATTGATGAA ATCACTGCTG TTGGAGACGC AAAGTTTAAA
AAGAAATGTT CAGATATATT CGATAAAATA AGAGAAAAAT CTCATTTAAT AATGGTGTCA
CATAGTGAAC GAGCTTTAAA GGAGTATTGT GATGTTGCTA TTTATCTTAA CAAAGAGGGG
CAAGGTAAAT TTTATAAAAA TGTTACGGAA GCCATTGCTG ATTACAAAAA AGACCTATAG
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| Protein sequence | MIKIENLTKS YRTPTGRHYV FKNLNIIFPK GYNIALIGQN GAGKSTLLRI IGGIDRPDSG
NIITEHKISW PVGLAGGFQG SLTGRENVKF VARLYAKRDE LNERVDFVEE FSELGKYFDM
PIKTYSSGMR SRLAFGLSMA FKFDYYLIDE ITAVGDAKFK KKCSDIFDKI REKSHLIMVS
HSERALKEYC DVAIYLNKEG QGKFYKNVTE AIADYKKDL
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