| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3223 |
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| Symbol | kpsC |
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| ID | 6144878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3294939 |
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| End bp | 3296972 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641618056 |
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| Product | polysialic acid capsule polysaccharide export protein KpsC |
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| Protein accession | YP_001745206 |
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| Protein GI | 170680172 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGCA TTTACTCGCC TGGCATCTGG CGTATTCCGC ATCTGGAGAA ATTTCTGGCG
CAACCGTGCC AGAAACTTTC TCTGCTGCGT CCTGTTCCGC AAAACGTCGA TGCTATCGCC
GTGTGGGGAC ATCGTCCCAG CGCGGCGAAA CCAGTCGCCA TCGCCAAAGC CGCGGGAAAA
CCCGTCATTC GTCTGGAAGA TGGATTTGTG CGTTCGCTGG GTCTTGGCGT CAATGGCGAG
CCGCCGCTTT CTCTGGTGGT GGATGATTGT GGCATTTACT ACGATGCCAG CAAGCCTTCA
GCACTGGAGA AACTGGTACA GGATAAAGCC GGAAATACAG CTCTGATAAG CCAGGCCAGA
GAAGCGATGC ACACCATCGT GACCGGGGAT TTGTCGAAAT ATAACCTGGC ACCTGCGTTT
GTGGCTGATG AGTCTGAACG TTCAGACATC GTTCTGGTTG TCGATCAGAC ATTTAATGAT
ATGTCAGTGA CGTATGGCAA TGCTGGCCCG CATGAGTTTG CTGCCATGCT GGAAGCCGCG
ATGGCGGAAA ATCCTCAAGC CGAAATTTGG GTGAAGGTGC ACCCAGATGT ACTGGAAGGA
AAAAAAACAG GTTATTTCGC CGATCTGCGC GCCACGCAAC GAGTACGTTT AATTGCCGAG
AATGTCAGCC CGCAGTCGCT GTTGCGACAC GTTTCCCGGG TTTACGTCGT GACCTCCCAG
TACGGCTTTG AAGCCTTGCT GGCAGGAAAA CCAGTAACAT GTTTCGGCCA GCCCTGGTAT
GCAGGCTGGG GCTTAACCGA CGATCGCCAT CCGCAGTCCG CTTTGTTATC TGCCCGACGC
GGTTCTGCCA CGCTGGAGGA ACTTTTTGCC GCTGCATACC TGCGTTACTG TCGCTATATC
TACCCGCAAA CGGGAGAAGT AAGCAATCTA TTTACCGTGC TGCAATGGCT GCAATTACAA
CGTCGACATC TGCAACAGCG TAATGGTTAT TTATGGGCGC CAGGCTTAAC GCTGTGGAAG
TCAGCGATCC TGAAACCTTT CTTGCAAACG GCAACAAACC GGCTGAGTTT TTCACGTCGC
TGTACTGCGG CGAGCGCCTG CGTGGTATGG GGTGTAAAGG GAGAACAGCA ATGGCGAGCC
GAAGCGCAGC GAAAATCACT GCCGTTATGG CGAATGGAAG ATGGTTTTCT GCGTTCATCC
GGACTTGGCT CTGACCTGCT GCCGCCGCTA TCGCTGGTGC TGGATAAACG CGGTATTTAC
TATGACGCCA CGCGCCCCAG CGATCTGGAA GTGCTGCTGA ATCATAGCCA GCTAACGCTG
GCGCAGAAGA TGCGAGCTGA AAAATTACGC CAGCGACTGG TTGAAAGCAA ACTGAGTAAG
TACAACCTGG GAGCCGATTT CTCTCTACCA GCCGAAGCCA AAGATAAAAA AGTTATCCTG
GTGCCGGGTC AGGTAGAAGA CGATGCCTCA ATTAAAACCG GCACCGTTTC TATTAAGAGC
AACCTTGAGT TATTACGCAC AGTACGCGAG CGTAATCCGC ACGCTTACAT TATTTATAAA
CCGCACCCGG ATGTACTGGT GGGGAATCGC AAGGGCAATA TTCCGACAGA ACTAATTGCT
GAACTCGCTG ATTATCAGGC ACTGGACGCA GATATTATTC AATGCATTCT GCGCGCAGAT
GAAGTGCACA CCATGACATC ATTGTCCGGG TTTGAAGCGT TATTACATGG CAAGCACGTA
CATTGTTACG GCCTGCCCTT CTATGCCGGT TGGGGTTTAA CCGTCGATGA ACATCGCTGC
CCGCGTCGCG AGCGAAAATT AACGTTAGCG GATTTGATCT ATCAGGCGCT GATTGTTTAT
CCAACCTATA TCCACCCAAC ATGGCTACAA CCTATTACGG TAGAAGAAGC TGCGGAATAT
TTAATCAAGA CGCCGCGCAA GCCGATGTTT ATTACCCGAA AAAAAGCGGT AATACGCTAT
TACCGCAAAT TAATTATGTT CTGCAAGGTC AGATTTGGCC AAACAATTTC ATAG
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| Protein sequence | MIGIYSPGIW RIPHLEKFLA QPCQKLSLLR PVPQNVDAIA VWGHRPSAAK PVAIAKAAGK
PVIRLEDGFV RSLGLGVNGE PPLSLVVDDC GIYYDASKPS ALEKLVQDKA GNTALISQAR
EAMHTIVTGD LSKYNLAPAF VADESERSDI VLVVDQTFND MSVTYGNAGP HEFAAMLEAA
MAENPQAEIW VKVHPDVLEG KKTGYFADLR ATQRVRLIAE NVSPQSLLRH VSRVYVVTSQ
YGFEALLAGK PVTCFGQPWY AGWGLTDDRH PQSALLSARR GSATLEELFA AAYLRYCRYI
YPQTGEVSNL FTVLQWLQLQ RRHLQQRNGY LWAPGLTLWK SAILKPFLQT ATNRLSFSRR
CTAASACVVW GVKGEQQWRA EAQRKSLPLW RMEDGFLRSS GLGSDLLPPL SLVLDKRGIY
YDATRPSDLE VLLNHSQLTL AQKMRAEKLR QRLVESKLSK YNLGADFSLP AEAKDKKVIL
VPGQVEDDAS IKTGTVSIKS NLELLRTVRE RNPHAYIIYK PHPDVLVGNR KGNIPTELIA
ELADYQALDA DIIQCILRAD EVHTMTSLSG FEALLHGKHV HCYGLPFYAG WGLTVDEHRC
PRRERKLTLA DLIYQALIVY PTYIHPTWLQ PITVEEAAEY LIKTPRKPMF ITRKKAVIRY
YRKLIMFCKV RFGQTIS
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