Gene EcSMS35_3209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3209 
Symbol 
ID6142822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3284891 
End bp3285367 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content58% 
IMG OID641618042 
ProductRadC family DNA repair protein 
Protein accessionYP_001745192 
Protein GI170683005 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC TTTCCTTTCT GCCCGGAGAG ATGACGCCCG GCGAGCGCAG CCTCATTCAA 
CGGGCCCTGA AAACCCTGGA CCGCCATCTT CATGAACCCG GCGTGGCCTT CACCTCCACG
CATGCGGCAC GGGAATGGCT GATTCTGAAC ATGGCAGGAC TGGAGCGGGA AGAGTTCCGG
GTGCTGTATC TGAACAACCA GAATCAGCTG ATTGCGGGTG AAACCCTCTT CACAGGCACC
ATCAACCGCA CAGAAGTCCA TCCCCGGGAG GTGATTAAAC GTGCCCTGTA CCACAATGCC
GCTGCCGTGG TGCTGGCGCA CAATCACCCG TCCGGTGAAG TCACCCCCAG TAAGGCAGAC
CGGCTTATCA CTGAACGTCT GGTACAGGCG CTGGCCCTGG TGGATATCCG GGTGCCGGAC
CATCTGATAG TCGGTGGCAA CCAGGTATTC TCCTTTGCCG AACACGGTCT GCTTTAA
 
Protein sequence
MQQLSFLPGE MTPGERSLIQ RALKTLDRHL HEPGVAFTST HAAREWLILN MAGLEREEFR 
VLYLNNQNQL IAGETLFTGT INRTEVHPRE VIKRALYHNA AAVVLAHNHP SGEVTPSKAD
RLITERLVQA LALVDIRVPD HLIVGGNQVF SFAEHGLL