| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3173 |
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| Symbol | sitD_2 |
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| ID | 6142772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3253765 |
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| End bp | 3254643 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641618017 |
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| Product | iron/manganese transport system membrane protein SitD |
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| Protein accession | YP_001745167 |
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| Protein GI | 170682856 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.568533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.636939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCAT TATTACTGGA GCCACTGCAG TTCACCTTTA TGAGTCACGC ACTGCTGATT
TCACTGGTAG TTTCCATACC CTGTGCGCTG CTGTCGGTCT TTCTGGTCCT GAAAGGTTGG
GCACTGATGG GAGACGCGAT GAGTCATGCG GTTTTTCCTG GTATCGTGCT TGCGTGGATA
CTGGGTTTTC CTCTGGCGGG AGGAGCATTT GTCGCCGGAG TATTCTGCGC GGTGGCGACG
GGATACCTGA AAGACAACAG CCGAATCAAG CAAGATACAG TGATGGGGAT TGTTTTTTCT
GGCATGTTTG CCGCAGGTCT GATCTTGTAT ATTGCAGTCA AACCCGACGT ACATCTTGAC
CATATTCTTT TCGGCGACAT GCTCGGGGTA ACCATCGGCG ATATAATCCA GACGGTGATT
ATTGCCGGGC TGGTTACACT TGTTATTAGC GTAAAATGGC GGGATTTTTT GCTGTTCAGC
TTTGATTATC AACAGGCGCA GGTAAGCGGT TTGCATACGA GATGGCTGCA TTATGGGCTG
CTGTGCATGG TCTCTCTGAC CATTGTGGCG ACGCTGAAAG CGGTAGGTAT CATTCTCTCC
ATTTCTCTGC TCATTGCGCC TGGCGCCATT GCGGTACTCC TGACGCAACG CTTTCATATT
GCGCTCCTGC TGGCGCTCGG TATATCGGTA ATGGTCTCAA TGACTGGTGT ATGGCTCTCC
TTTTTTATAG ACAGCGCACC AGCACCAACG ATTGTTATCT TATTCACGGT TGTATTCATC
CTGACGTTTA CCGCTTCCAG CATCAATGCT CACGCGAAGG AAAATGTCGA TCCACAGGAT
CTCCCGACTA GTACAACAAC CAGAGAGCAA CATCTGTAG
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| Protein sequence | MMALLLEPLQ FTFMSHALLI SLVVSIPCAL LSVFLVLKGW ALMGDAMSHA VFPGIVLAWI
LGFPLAGGAF VAGVFCAVAT GYLKDNSRIK QDTVMGIVFS GMFAAGLILY IAVKPDVHLD
HILFGDMLGV TIGDIIQTVI IAGLVTLVIS VKWRDFLLFS FDYQQAQVSG LHTRWLHYGL
LCMVSLTIVA TLKAVGIILS ISLLIAPGAI AVLLTQRFHI ALLLALGISV MVSMTGVWLS
FFIDSAPAPT IVILFTVVFI LTFTASSINA HAKENVDPQD LPTSTTTREQ HL
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