| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3165 |
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| Symbol | |
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| ID | 6145246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3247252 |
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| End bp | 3248157 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618011 |
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| Product | IS2 transposase orfB |
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| Protein accession | YP_001745161 |
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| Protein GI | 170683785 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.366233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAGCG CACGCGCCCT TATTGCCCGG GGATGGGGAG TAAGCTTAGT CAGCCGTTGT
CTCCGGGTGT CGCGTGCGCA GTTGCACGTC ATTATCAGAC GAACCGATGA CTGGATGGAT
GGCCGCCGCA GTCGTCACAC TGATGATACG GATGTGCTTC TCCGTATACA CCATGTTATC
GGAGAGCTGC CCACGTATGG TTATCGTCGG GTATGGGCGC TGCTTCGCAG ACAGGCAGAA
CTTGATGGTA TGCCTGCGAT CAATGCCAAA CGTGTTTACC GGATCATGCG CCAGAATGCG
CTGTTGCTTG AGCGAAAACC TGCTGTACCG CCATCGAAAC GGGCACATAC AGGCAGAGTG
GCCGTGAAAG AAAGCAATCA GCGATGGTGC TCTGACGGGT TCGAGTTCTG CTGTGATAAC
GGAGAGAGAC TGCGTGTCAC GTTCGCGCTG GACTGCTGTG ATCGTGAGGC ACTGCACTGG
GCGGTCACTA CCGGCGGCTT CAACAGTGAA ACAGTACAGG ACGTCATGCT GGGAGCGGTG
GAACGCCGCT TCGGCAACGA TCTTCCGTCG TCTCCAGTGG AGTGGCTGAC GGATAATGGT
TCATGCTACC GGGCTAATGA AACACGCCAG TTCGCCCGGA TGTTGGGACT TGAACCGAAG
AACACGGCGG TGCGGAGTCC GGAGAGTAAC GGAATAGCAG AGAGCTTCGT GAAAACGATA
AAGCGTGACT ACATCAGTAT CATGCCCAAA CCAGACGGGT TAACGGCAGC AAAGAACCTT
GCAGAGGCGT TCGAGCATTA TAACGAATGG CATCCGCATA GTGCGCTGGG TTATCGCTCG
CCACGGGAAT ATCTGCGGCA GCGGGCTTGT AATGGGTTAA GTGATAACAG ATGTCTGGAA
ATATAG
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| Protein sequence | MDSARALIAR GWGVSLVSRC LRVSRAQLHV IIRRTDDWMD GRRSRHTDDT DVLLRIHHVI
GELPTYGYRR VWALLRRQAE LDGMPAINAK RVYRIMRQNA LLLERKPAVP PSKRAHTGRV
AVKESNQRWC SDGFEFCCDN GERLRVTFAL DCCDREALHW AVTTGGFNSE TVQDVMLGAV
ERRFGNDLPS SPVEWLTDNG SCYRANETRQ FARMLGLEPK NTAVRSPESN GIAESFVKTI
KRDYISIMPK PDGLTAAKNL AEAFEHYNEW HPHSALGYRS PREYLRQRAC NGLSDNRCLE
I
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