Gene EcSMS35_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3120 
Symbol 
ID6142830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3207580 
End bp3207804 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content37% 
IMG OID641617987 
Producthypothetical protein 
Protein accessionYP_001745137 
Protein GI170680853 
COG category[S] Function unknown 
COG ID[COG4875] Uncharacterized protein conserved in bacteria with a cystatin-like fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.43305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAAATATTTT AATTCTGTGT CTGTTTTCTG GAGCGTCGTG GGCAAGTGAC 
GTAGATAATG TTAAGTGTAT TCGGGTAGAT AGTAAAGACA TTGAAAGGTT ATTCGATCGC
TGGAATGAAT CATTAAAAAC AGGTGATGCC AAGAAGGTTG CTGATAACTA TTTAAGTGAT
GCGATCTTAC TGCCCACAGG TGATGCTGCC AACTTACTGA TTTAG
 
Protein sequence
MKKINILILC LFSGASWASD VDNVKCIRVD SKDIERLFDR WNESLKTGDA KKVADNYLSD 
AILLPTGDAA NLLI