Gene EcSMS35_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3119 
Symbol 
ID6143024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3207276 
End bp3207551 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content53% 
IMG OID641617986 
ProductIS1 transposase orfA 
Protein accessionYP_001745136 
Protein GI170683540 
COG category[L] Replication, recombination and repair 
COG ID[COG3677] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.435416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTCTG TTTCTATCAG CTGTCCCTCC TGTTCAGCTA CTGACGGGGT GGTGCGTAAC 
GGCAAAAGCA CCGCCGGACA TCAGCGCTAT CTCTGCTCTC ACTGCCGTAA AACATGGCAA
CTGCAGTTCA CTTACACCGC TTCTCAACCC GGTACGCACC AGAAAATCAT TGATATGGCC
ATGAATGGCG TTGGATGCCG GGCAACTGCC CGCATTATGG GCGTTGGCCT CAACACGATT
TTACGTCACT TAAAAAACTC AGGCCGCAGT CGGTAA
 
Protein sequence
MASVSISCPS CSATDGVVRN GKSTAGHQRY LCSHCRKTWQ LQFTYTASQP GTHQKIIDMA 
MNGVGCRATA RIMGVGLNTI LRHLKNSGRS R