| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3115 |
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| Symbol | lacY |
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| ID | 6146325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3202040 |
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| End bp | 3203317 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641617982 |
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| Product | galactoside permease |
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| Protein accession | YP_001745132 |
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| Protein GI | 170683854 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00882] oligosaccharide:H+ symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0255021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCTG CAAGTACGCA TAAAAATCCC GATTTCTGGA TTTTCGGTCT GTTCTTCTTT
CTCTACTTTT TCATCATGGC AACCTGTTTT CCGTTTTTGC CTGTATGGCT GTCCGATGTG
GTCGGACTGA GTAAAACGGA TACAGGTATA GTCTTTTCAT GTCTTTCTCT GTTTGCCATC
AGTTTCCAGC CATTGCTTGG GGTCATATCA GATCGCCTGG GACTGAAAAA AAACCTGATC
TGGAGTATCA GCCTGTTACT TGTATTTTTC GCCCCCTTTT TTTTATATGT ATTTGCGCCC
CTGCTGCGCT TCAATATCTG GGCAGGCGCA CTGACTGGCG GTGTCTTTAT TGGTTTTGTG
TTTTCTGCAG GTGCCGGAGC TATTGAAGCT TATATAGAGC GGGTCAGTCG CAGTCGTGGA
TTTGAATACG GTAAAGCGAG GATGTTCGGG TGTCTGGGCT GGGCGTTATG TGCGGCTATG
GCTGGAATGC TTTTTAATGT CGATCCTTCT CTGGTTTTCT GGATGGGGTC AGGAAGCGCA
TTATTGTTGC TTCTTCTGTT GTTTCTGGCG CGCCCCAGTA CCAGCCAGAC GGCAATGGTT
ATGAATACAC TGGGTGCCAA TTCTTCCCTG ATTTCGACCA GAATGGTCTT CAGCCTGTTT
CGCATGCGTC AGATGTGGAT GTTTGTTCTC TACACGATTG GTGTGGCCTG TGTCTATGAT
GTATTTGATC AGCAGTTTGC CACATTTTTT CGTTCATTCT TTGACACTCC TCAGGCAGGA
ATAAAAGCAT TCGGATTTGC TACCACTGCG GGGGAGATTT GTAATGCCAT TATCATGTTC
TGTACACCAT GGATAATTCA TCGCATTGGT GCCAAAAATA CCCTGCTTGT TGCGGGGGGA
ATTATGACCA TCCGCATTAC CGGTTCTGCT TTTGCCACCA CCGCGACAGA AGTGGTGATT
CTGAAAATGC TTCACGCTCT TGAAGTTCCA TTTTTGCTGG TTGGGGCGTT CAAATATATT
ACGGCAGTGT TTGACACCCG ACTGTCAGCG ACCGTTTATT TAATAGGTTT TCAGTTTTCC
AAACAACTTG CTGCAATACT TCTCTCTACC TTTGCCGGCC ACCTGTATGA TCGTATGGGA
TTCCAGAATA CGTATTTTGT GCTCGGGATG ATTGCTCTGA CTGTTACCGT GATATCAGTT
TTCACGCTGA GTTCTTCCCG CGGGAGCGTA CACCCTTCTG TAGAAAAAGC CCCTGCAGCG
CATTCGGAGA TTAACTGA
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| Protein sequence | MNSASTHKNP DFWIFGLFFF LYFFIMATCF PFLPVWLSDV VGLSKTDTGI VFSCLSLFAI
SFQPLLGVIS DRLGLKKNLI WSISLLLVFF APFFLYVFAP LLRFNIWAGA LTGGVFIGFV
FSAGAGAIEA YIERVSRSRG FEYGKARMFG CLGWALCAAM AGMLFNVDPS LVFWMGSGSA
LLLLLLLFLA RPSTSQTAMV MNTLGANSSL ISTRMVFSLF RMRQMWMFVL YTIGVACVYD
VFDQQFATFF RSFFDTPQAG IKAFGFATTA GEICNAIIMF CTPWIIHRIG AKNTLLVAGG
IMTIRITGSA FATTATEVVI LKMLHALEVP FLLVGAFKYI TAVFDTRLSA TVYLIGFQFS
KQLAAILLST FAGHLYDRMG FQNTYFVLGM IALTVTVISV FTLSSSRGSV HPSVEKAPAA
HSEIN
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