Gene EcSMS35_3099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3099 
SymbolansB 
ID6146057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3186489 
End bp3187535 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID641617967 
ProductL-asparaginase II 
Protein accessionYP_001745118 
Protein GI170682068 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00520] L-asparaginases, type II 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.00149168 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTTTT TCAAAAAGAC GGCACTTGCC GCACTGGTTA TGGGTTTTAG TGGTGCAGCA 
TTGGCATTAC CCAATATCAC CATTTTAGCA ACCGGCGGGA CCATTGCCGG TGGTGGTGAC
TCCGCAACCA AATCTAACTA CACAGCGGGT AAAGTTGGCG TAGAAAATCT GGTTAATGCG
GTGCCGCAAC TGAAGGACAT TGCGAACGTT AAAGGCGAGC AGGTAGTGAA TATCGGCTCC
CAGGACATGA ACGATAATGT CTGGCTGACA CTGGCGAAAA AAATTAACAC CGACTGCGAT
AAAACCGACG GCTTCGTCAT TACCCACGGT ACCGACACGA TGGAAGAAAC CGCTTACTTC
CTCGACCTGA CGGTGAAATG CGACAAACCG GTGGTGATGG TCGGCGCAAT GCGCCCGTCC
ACGTCCATGA GCGCAGACGG TCCATTCAAC CTGTATAACG CGGTAGTGAC CGCAGCTGAT
AAAGCCTCCG CTAATCGTGG CGTGCTGGTT GTGATGAACG ACACCGTACT GGACGGTCGC
GATGTCACCA AAACCAACAC CACCGACGTA GCGACCTTCA AGTCTGTTAA CTACGGTCCT
CTGGGATACA TTCACAACGG TAAGATTGAC TACCAACGTA CCCCGGCACG TAAGCACACC
AGCGATACGC CATTCGATGT CTCTAAGCTG AATGAGCTGC CGAAAGTCGG CATCGTTTAT
AACTACGCTA ACGCATCCGA TCTTCCGGCT AAAGCACTGG TAGATGCGGG CTATGATGGC
ATCGTTAGCG CTGGTGTGGG TAATGGTAAC CTGTATAAAT CTGTGTTCGA CACGCTGGCG
ACCGCCGCGA AAAACGGCAC TGCAGTCGTG CGTTCTTCCC GCGTACCGAC GGGCGCTACC
ACTCAGGATG CCGAAGTGGA TGATGCGAAA TACGGCTTCG TCGCCTCTGG CACGCTGAAC
CCGCAAAAAG CGCGCGTCCT GCTGCAGCTG GCTCTGACGC AAACCAAAGA TCCGCAGCAG
ATCCAGCAGA TCTTCAATCA GTACTAA
 
Protein sequence
MEFFKKTALA ALVMGFSGAA LALPNITILA TGGTIAGGGD SATKSNYTAG KVGVENLVNA 
VPQLKDIANV KGEQVVNIGS QDMNDNVWLT LAKKINTDCD KTDGFVITHG TDTMEETAYF
LDLTVKCDKP VVMVGAMRPS TSMSADGPFN LYNAVVTAAD KASANRGVLV VMNDTVLDGR
DVTKTNTTDV ATFKSVNYGP LGYIHNGKID YQRTPARKHT SDTPFDVSKL NELPKVGIVY
NYANASDLPA KALVDAGYDG IVSAGVGNGN LYKSVFDTLA TAAKNGTAVV RSSRVPTGAT
TQDAEVDDAK YGFVASGTLN PQKARVLLQL ALTQTKDPQQ IQQIFNQY