Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3087 |
Symbol | endA |
ID | 6147036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3177245 |
End bp | 3177952 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617955 |
Product | endonuclease I |
Protein accession | YP_001745106 |
Protein GI | 170682683 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00686191 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000298257 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACCGTT ATTTGTCTAT TGCTGCGGTG GTACTGAGCG CAGCATTTTC CAGCCCGGCG TTGGCCGAAG GTATCAATAG TTTTTCTCAG GCGAAAGCCG CGGCGGTAAA AGTCCACGCT GACGCGCCCG GTACGTTTTA TTGCGGATGT AAAATTAACT GGCAGGGCAA AAAAGGCGTT GTTGATCTGC AATCGTGCGG CTATCAGGTG CGCAAAAATG AAAACCGCGC CAGCCGCGTA GAGTGGGAAC ACGTCGTTCC TGCCTGGCAA TTCGGTCACC AGCGCCAGTG CTGGCAGGAC GGTGGACGTA AAAACTGTGC TAAAGATCCG GTCTATCGCA AGATGGAAAG CGATATGCAT AACCTGCAAC CGTCAGTCGG TGAAGTGAAT GGCGATCGCG GCAACTTTAT GTACAGCCAG TGGAATGGCG GCGAAGGCCA GTACGGTCAA TGCGCCATGA AGGTCGATTT CAAAGAAAAA GCAGCCGAAC CACCAGCGCG TGCACGCGGT GCCATTGCGC GCACCTACTT CTATATGCGT GACCAATACA ACCTGACACT CTCTCGCCAG CAAACGCAGC TGTTCAACGC ATGGGACAAG ATGTATCCGG TTACCGACTG GGAGTGCGAG CGCGATGAAC GCATCGCGAA GGTGCAGGGC AATCATAACC CGTATGTGCA ACGCGCTTGC CAGGCGCGAA AGAGCTAA
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Protein sequence | MYRYLSIAAV VLSAAFSSPA LAEGINSFSQ AKAAAVKVHA DAPGTFYCGC KINWQGKKGV VDLQSCGYQV RKNENRASRV EWEHVVPAWQ FGHQRQCWQD GGRKNCAKDP VYRKMESDMH NLQPSVGEVN GDRGNFMYSQ WNGGEGQYGQ CAMKVDFKEK AAEPPARARG AIARTYFYMR DQYNLTLSRQ QTQLFNAWDK MYPVTDWECE RDERIAKVQG NHNPYVQRAC QARKS
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