| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3079 |
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| Symbol | speB |
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| ID | 6146468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3168888 |
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| End bp | 3169808 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617947 |
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| Product | agmatinase |
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| Protein accession | YP_001745098 |
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| Protein GI | 170682959 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00297049 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACCT TAGGTCATCA ATACGATAAC TCACTGGTTT CCAACGCCTT TGGTTTTTTA
CGCCTGCCGA TGAACTTCCA GCCATATGAC AGCGATGCTG ACTGGGTGAT TACTGGCGTG
CCGTTCGATA TGGCCACTTC TGGTCGTGCG GGTGGACGCC ACGGTCCGGC AGCTATCCGT
CAGGTTTCGA CGAATCTGGC CTGGGAACAC AATCGCTTCC CGTGGAATTT CGACATGCGT
GAGCGCCTGA ACGTCGTGGA CTGCGGCGAT CTGGTATATG CCTTCGGAGA TGCCCGTGAG
ATGAGCGAGA AGCTGCAGGC GCACGCCGAG AAGCTGCTGG CTGCCGGTAA GCGTATGCTC
TCCTTCGGTG GTGACCACTT TGTTACGCTG CCGCTGCTGC GTGCTCATGC GAAGCATTTC
GGTAAAATGG CGCTGGTACA CTTTGACGCC CACACCGATA CCTATGCGAA CGGTTGTGAA
TTTGACCACG GCACCATGTT CTATACCGCG CCGAAAGAAG GTCTGATCGA CCCGAATCAT
TCCGTGCAGA TTGGTATTCG TACCGAGTTT GATAAAGACA ACGGCTTTAC CGTGCTGGAC
GCCTGCCAGG TGAACGATCG CAGCGTGGAT GACGTTATCG CCCAGGTGAA ACAGATTGTG
GGTGATATGC CGGTTTACCT GACCTTTGAT ATCGACTGCC TGGATCCTGC TTTTGCACCA
GGCACCGGTA CGCCAGTGAT TGGCGGCCTG ACCTCCGATC GCGCTATTAA ACTGGTACGC
GGCCTGAAAG ATCTCAACAT CGTTGGGATG GACGTAGTGG AAGTGGCTCC GGCATACGAT
CAGTCGGAAA TCACCGCTCT GGCTGCGGCG ACGCTGGCGC TGGAAATGCT GTATATTCAG
GCGGCGAAAA AGGGCGAGTA A
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| Protein sequence | MSTLGHQYDN SLVSNAFGFL RLPMNFQPYD SDADWVITGV PFDMATSGRA GGRHGPAAIR
QVSTNLAWEH NRFPWNFDMR ERLNVVDCGD LVYAFGDARE MSEKLQAHAE KLLAAGKRML
SFGGDHFVTL PLLRAHAKHF GKMALVHFDA HTDTYANGCE FDHGTMFYTA PKEGLIDPNH
SVQIGIRTEF DKDNGFTVLD ACQVNDRSVD DVIAQVKQIV GDMPVYLTFD IDCLDPAFAP
GTGTPVIGGL TSDRAIKLVR GLKDLNIVGM DVVEVAPAYD QSEITALAAA TLALEMLYIQ
AAKKGE
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