| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3077 |
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| Symbol | tktA |
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| ID | 6144686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3165813 |
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| End bp | 3167804 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641617945 |
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| Product | transketolase |
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| Protein accession | YP_001745096 |
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| Protein GI | 170681853 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.00342437 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCTCAC GTAAAGAGCT TGCCAATGCT ATTCGTGCGC TGAGCATGGA CGCAGTACAG
AAAGCCAAAT CCGGTCACCC GGGTGCCCCT ATGGGTATGG CTGACATTGC CGAAGTCCTG
TGGCGTGATT TCCTGAAACA CAACCCGCAG AATCCGTCCT GGGCTGACCG TGACCGCTTC
GTGCTGTCCA ACGGCCACGG CTCCATGCTG ATCTACAGCC TGCTGCACCT CACCGGTTAC
GATCTGCCGA TGGAAGAACT GAAAAACTTC CGTCAGCTGC ACTCTAAAAC TCCGGGCCAC
CCGGAAGTGG GTTACACCGC TGGTGTGGAA ACCACTACAG GTCCGCTGGG TCAGGGTATT
GCCAACGCAG TCGGTATGGC GATTGCAGAA AAAACGCTGG CGGCGCAGTT TAACCGTCCG
GGCCACGACA TCGTCGACCA CTACACCTAC GCCTTCATGG GCGACGGCTG CATGATGGAA
GGCATCTCCC ACGAAGTTTG TTCTCTGGCG GGTACGCTGA AGCTGGGTAA ACTGATTGCG
TTCTACGATG ACAACGGTAT CTCTATCGAT GGTCACGTTG AAGGCTGGTT CACCGACGAC
ACCGCAATGC GTTTCGAAGC TTACGGCTGG CACGTTATTC GCGACATCGA CGGTCATGAC
GCGGCATCCA TCAAACGCGC AGTAGAAGAA GCGCGCGCAG TGACTGACAA ACCGTCCCTG
CTGATGTGCA AAACCATCAT CGGTTTCGGT TCCCCGAACA AAGCCGGTAC GCATGACTCC
CACGGTGCGC CGCTGGGCGA TGCTGAAATC GCCCTGACCC GCGAACAGCT GGGCTGGAAA
TATGCACCGT TCGAAATCCC GTCTGAAATC TATGCTCAGT GGGATGCGAA AGAAGCAGGC
CAGGCGAAAG AATCCGCATG GAACGAGAAA TTCGCTGCTT ACGCGAAAGC TTATCCGCAG
GAAGCCGCTG AATTTACCCG CCGTATGAAA GGCGAAATGC CGTCTGACTT CGACGCCAAA
GCGAAAGAAT TCATCGCTAA ACTGCAGGCT AATCCGGCGA AAATCGCCAG TCGTAAAGCG
TCTCAGAATG CGATTGAAGC GTTCGGTCCG CTGTTGCCGG AATTCCTCGG CGGCTCTGCT
GACCTGGCAC CGTCTAACCT GACCCTGTGG TCTGGTTCTA AAGCAATCAA CGAAGATGCT
GCGGGTAACT ACATCCACTA CGGTGTTCGC GAGTTCGGTA TGACCGCGAT TGCTAACGGT
ATCTCCCTGC ACGGTGGTTT CCTGCCGTAC ACCTCCACCT TCCTGATGTT CGTGGAATAC
GCACGTAACG CCGTACGTAT GGCTGCGCTG ATGAAACAGC GTCAGGTGAT GGTTTACACC
CACGACTCCA TCGGTCTGGG CGAAGATGGC CCGACTCACC AGCCGGTTGA GCAGGTCGCT
TCACTGCGCG TGACCCCGAA CATGTCTACA TGGCGTCCAT GTGACCAGGT TGAATCTGCA
GTGGCATGGA AATACGGCGT TGAGCGTCAG GACGGCCCGA CCGCGCTGAT CCTCTCCCGT
CAGAACCTGG CGCAGCAGGA ACGTACTGAA GAGCAGCTGG CAAACATCGC GCGCGGTGGT
TATGTGCTGA AAGACTGTGC CGGTCAGCCG GAACTGATCT TCATCGCGAC CGGTTCGGAA
GTTGAACTGG CTGTTGCCGC CTACGAAAAA CTGACAGCCG AAGGCGTGAA GGCGCGCGTG
GTTTCCATGC CGTCTACCGA CGCGTTCGAC AAGCAGGATG CGGCTTACCG TGAATCCGTA
CTGCCGAAAG CGGTTACTGC ACGCGTTGCG GTAGAAGCGG GTATTGCTGA CTACTGGTAC
AAGTATGTTG GCCTGAACGG CGCTATCGTC GGCATGACCA CCTTCGGTGA ATCTGCTCCG
GCAGAACTGC TGTTTGAAGA GTTCGGCTTC ACCGTTGACA ACGTTGTTGC GAAAGCCAAA
GCGCTGCTGT AA
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| Protein sequence | MSSRKELANA IRALSMDAVQ KAKSGHPGAP MGMADIAEVL WRDFLKHNPQ NPSWADRDRF
VLSNGHGSML IYSLLHLTGY DLPMEELKNF RQLHSKTPGH PEVGYTAGVE TTTGPLGQGI
ANAVGMAIAE KTLAAQFNRP GHDIVDHYTY AFMGDGCMME GISHEVCSLA GTLKLGKLIA
FYDDNGISID GHVEGWFTDD TAMRFEAYGW HVIRDIDGHD AASIKRAVEE ARAVTDKPSL
LMCKTIIGFG SPNKAGTHDS HGAPLGDAEI ALTREQLGWK YAPFEIPSEI YAQWDAKEAG
QAKESAWNEK FAAYAKAYPQ EAAEFTRRMK GEMPSDFDAK AKEFIAKLQA NPAKIASRKA
SQNAIEAFGP LLPEFLGGSA DLAPSNLTLW SGSKAINEDA AGNYIHYGVR EFGMTAIANG
ISLHGGFLPY TSTFLMFVEY ARNAVRMAAL MKQRQVMVYT HDSIGLGEDG PTHQPVEQVA
SLRVTPNMST WRPCDQVESA VAWKYGVERQ DGPTALILSR QNLAQQERTE EQLANIARGG
YVLKDCAGQP ELIFIATGSE VELAVAAYEK LTAEGVKARV VSMPSTDAFD KQDAAYRESV
LPKAVTARVA VEAGIADYWY KYVGLNGAIV GMTTFGESAP AELLFEEFGF TVDNVVAKAK
ALL
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