| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3075 |
|---|
| Symbol | cmtB |
|---|
| ID | 6143813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3163865 |
|---|
| End bp | 3164308 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641617943 |
|---|
| Product | putative mannitol phosphotransferase subunit EIIA |
|---|
| Protein accession | YP_001745094 |
|---|
| Protein GI | 170680302 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0042084 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTTA TTAATTATTT TCCAGAATCA TCAATTTCAG TTATACATTC AGCAAAAGAC
TGGCAGGAAG CTATCGATTT CTCGATGGCA TCATTGCTGG ATAAAAACTA TATCAGCGAG
AATTACATTC AGGCTATTAA AGATTCCACC ATGAGTAATG GCCCTTACTA TATTCTCGCA
CCAGGCGTGG CAATGCCTCA TGCGCGACCA GAATGTGGGG CGCTTAAAAC CGGGATGTCT
TTAACGTTAC TTAAACAAGG CGTTTATTTT CCGGGGAATG ACGAACCAAT TAAATTACTC
ATCGGACTCT CTGCTGCCGA TGCCGATTCG CACATTGGCG CTATTCAGGC GTTAAGTGAA
TTACTGTGCG AAGAAGAAAT ACTCGAACAA CTCTTAACAG CATCATCAGA AAAACAATTA
GCGGACATTA TCAGCCGCGG ATAA
|
|---|
| Protein sequence | MRLINYFPES SISVIHSAKD WQEAIDFSMA SLLDKNYISE NYIQAIKDST MSNGPYYILA
PGVAMPHARP ECGALKTGMS LTLLKQGVYF PGNDEPIKLL IGLSAADADS HIGAIQALSE
LLCEEEILEQ LLTASSEKQL ADIISRG
|
|---|
| |