Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3065 |
Symbol | |
ID | 6143969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3155906 |
End bp | 3156337 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641617934 |
Product | hypothetical protein |
Protein accession | YP_001745085 |
Protein GI | 170680119 |
COG category | [R] General function prediction only |
COG ID | [COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0546245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACAT TGCCCTACCC ATATTCTTCC TCCGCACGCT TTTACGCGCT GCGCCTGCTC CCCGGGCAGG AAGTTCTCTC CCAATTACGC GCCTTCGCGC AGCAACAACA ACTCCACGCT GCGTGGATTG CAGGTTGTAC CGGCAGTCTG ACTGACGTCG CCTTACGCTA TGGCGGGCAA GAAAACACGG CCCTACTAAG CGGTAAGTTC GAAGTCATCG CATTGAACGG CACACTGGAA CAGAGTGGTG AACATCTTCA TCTCTGCGTT TCCGATCCAC ACGGCACGAT GCTTGGCGGT CATATGATGC CCGGCTGTAC CGTGCGGACC ACGCTTGAAC TGGTGATCGG TAGCCTTGAG GAACTGGCGT TTAGCCGCCA ACCTTGCGCG CTTTCTGGTT ACGACGAATT GCATATTTCC CCCGTTAAAT AA
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Protein sequence | MMTLPYPYSS SARFYALRLL PGQEVLSQLR AFAQQQQLHA AWIAGCTGSL TDVALRYGGQ ENTALLSGKF EVIALNGTLE QSGEHLHLCV SDPHGTMLGG HMMPGCTVRT TLELVIGSLE ELAFSRQPCA LSGYDELHIS PVK
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