Gene EcSMS35_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3063 
Symbolpgk 
ID6145576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3153302 
End bp3154465 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content52% 
IMG OID641617932 
Productphosphoglycerate kinase 
Protein accessionYP_001745083 
Protein GI170681168 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.18176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.182974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTAA TTAAGATGAC CGATCTGGAT CTTGCTGGGA AACGTGTATT TATCCGTGCG 
GATCTGAACG TACCAGTAAA AGACGGGAAA GTAACCAGCG ATGCGCGTAT CCGTGCTTCT
CTGCCGACCA TCGAACTGGC CCTGAAACAA GGCGCAAAAG TGATGGTAAC TTCCCACCTG
GGTCGTCCTA CCGAAGGCGA GTACAACGAA GAATTCTCTC TGCTGCCGGT TGTTAACTAC
CTGAAAGACA AACTGTCTAA CCCGGTTCGT CTGGTTAAAG ATTACCTCGA CGGCGTTGAC
GTTGCTGAAG GTGAACTGGT TGTTCTGGAA AACGTTCGCT TCAACAAAGG CGAGAAGAAA
GACGACGAAA CCCTGTCCAA AAAATACGCT GCACTGTGTG ACGTGTTCGT AATGGACGCA
TTCGGTACTG CTCACCGCGC GCAGGCTTCT ACTCACGGTA TCGGTAAATT CGCTGATGTT
GCGTGCGCAG GCCCGCTGCT GGCAGCTGAA CTGGACGCGC TGGGTAAAGC ACTGAAAGAA
CCAGCTCGCC CGATGGTGGC TATCGTTGGT GGTTCTAAAG TATCTACCAA ACTGACCGTT
CTGGACTCCC TGTCTAAAAT CGCTGACCAG CTGATTGTTG GTGGTGGTAT TGCTAACACC
TTTATCGCGG CACAAGGCCA CGATGTGGGT AAATCCCTGT ACGAAGCTGA CCTGGTTGAC
GAAGCTAAAC GTCTGCTGAC CACCTGCAAC ATCCCGGTTC CGTCTGACGT TCGCGTAGCG
ACTGAGTTCT CTGAAACCGC TCCGGCTACT CTGAAATCTG TTAACGACGT GAAAGCTGAC
GAGCAGATCC TGGATATCGG TGATGCTTCC GCTCAGGAAC TGGCTGAAAT CCTGAAGAAT
GCGAAAACCA TTCTGTGGAA CGGTCCGGTT GGCGTGTTCG AATTCCCGAA CTTCCGCAAA
GGTACCGAAA TTGTGGCTAA CGCTATCGCA GACAGCGAAG CGTTCTCCAT CGCTGGCGGC
GGCGACACTC TGGCAGCAAT CGACCTGTTC GGCATTGCTG ACAAAATCTC CTACATCTCC
ACTGGCGGCG GCGCATTCCT CGAATTCGTG GAAGGTAAAG TACTGCCTGC AGTAGCGATG
CTCGAAGAGC GCGCTAAGAA GTAA
 
Protein sequence
MSVIKMTDLD LAGKRVFIRA DLNVPVKDGK VTSDARIRAS LPTIELALKQ GAKVMVTSHL 
GRPTEGEYNE EFSLLPVVNY LKDKLSNPVR LVKDYLDGVD VAEGELVVLE NVRFNKGEKK
DDETLSKKYA ALCDVFVMDA FGTAHRAQAS THGIGKFADV ACAGPLLAAE LDALGKALKE
PARPMVAIVG GSKVSTKLTV LDSLSKIADQ LIVGGGIANT FIAAQGHDVG KSLYEADLVD
EAKRLLTTCN IPVPSDVRVA TEFSETAPAT LKSVNDVKAD EQILDIGDAS AQELAEILKN
AKTILWNGPV GVFEFPNFRK GTEIVANAIA DSEAFSIAGG GDTLAAIDLF GIADKISYIS
TGGGAFLEFV EGKVLPAVAM LEERAKK