Gene EcSMS35_3059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3059 
SymbolargO 
ID6145318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3148940 
End bp3149575 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content51% 
IMG OID641617928 
Productarginine exporter protein 
Protein accessionYP_001745079 
Protein GI170680655 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.832088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.417322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATATCTT ATTACTTTCA AGGTCTTGCT CTTGGGGCAG CTATGATTCT GCCGCTCGGC 
CCACAAAATG CTTTTGTGAT GAATCAGGGC ATTCGTCGTC AGTACCACAT TATGATTGCC
TTACTTTGCG CTATCAGCGA TTTGGTCCTG ATTTGCGCGG GGATTTTTGG TGGCAGCGCG
TTATTGATGC AGTCGCCGTG GTTGCTGGCG CTGGTCACCT GGGGCGGCGT AGCCTTCTTG
CTGTGGTATG GTTTTGGCGC TTTTAAAACA GCGATGAGCA GTAATATTGA GTTAGCCAGT
GCCGAAGTCC TGAAGCAAGG CAGATGGAAA ATTATCGCCA CCATGCTGGC AGTGACCTGG
CTGAATCCGC ATGTTTACCT GGATACTTTT GTTGTACTGG GCAGCCTTGG CGGGCAACTT
GATGTGGAAC CAAAACGTTG GTTTGCGCTC GGGACAATTA GCGCCTCTTT CCTGTGGTTC
TTTGGTCTGG CTATTCTCGC AGCCTGGCTG GCACCGCGCC TGCGCACGGC AAAATCACAA
CGCATTATCA ATCTGGTTGT GGGATGTGTT ATGTGGTTTA TTGCCTTGCA GCTGGCGAGA
GACGGTATTG CTCATGCACA AGCCTTGTTC AGTTAG
 
Protein sequence
MISYYFQGLA LGAAMILPLG PQNAFVMNQG IRRQYHIMIA LLCAISDLVL ICAGIFGGSA 
LLMQSPWLLA LVTWGGVAFL LWYGFGAFKT AMSSNIELAS AEVLKQGRWK IIATMLAVTW
LNPHVYLDTF VVLGSLGGQL DVEPKRWFAL GTISASFLWF FGLAILAAWL APRLRTAKSQ
RIINLVVGCV MWFIALQLAR DGIAHAQALF S