Gene EcSMS35_3058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3058 
Symbol 
ID6145721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3148107 
End bp3148847 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content53% 
IMG OID641617927 
Producthypothetical protein 
Protein accessionYP_001745078 
Protein GI170681135 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.550977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTCA AAGTTATCGC CCTGGCGGCA TTAATGGGTA TTAGCGGGAT GGCAGCGCAG 
GCTAACGAAT TGCCGGATGG ACCGCATATT GTCACCTCCG GTACGGCAAG CGTGGATGCG
GTGCCAGACA TTGCCACTCT TGCGATTGAA GTCAACGTGG CCGCGAAGGA TGCCGCTACT
GCCAAGAAAC AGGCGGATGA GCGCGTCGCA CAATACATTT CCTTCCTTGA ACTCAATCAG
ATCGCGAAAA AAGATATCAG CTCAGCGAAC TTACGCACCC AGCCAGATTA TGATTATCAG
GATGGTAAAA GTATCCTGAA AGGCTACCGT GCTGTGAGAA CGGTGGAAGT CACGCTCCGT
CAGTTAGACA AACTGAATTC CTTGCTGGAT GGCGCGCTGA AGGCGGGTCT TAACGAAATT
CGTTCTGTGT CGCTGGGCGT GGCGCAGCCG GATGCCTATA AAGACAAAGC GCGTAAGGCA
GCGATTGATA ACGCGATTCA TCAGGCGCAG GAACTGGCGA ACGGCTTTCA TCGTAAACTG
GGGCCGGTAT ATAGCGTGCG CTACCATGTT TCCAACTATC AGCCCAGCCC AATGGTGCGG
ATGATGAAAG CCGATGCCGC GCCGGTGTCC GCCCAGGAAA CTTACGAGCA GGCCGCTATT
CAGTTTGATG ATCAGGTCGA TGTGGTCTTC CAGTTAGAAC CTGTGGATCA ACAACCCGCT
AAAACACCTG CAGCACAATA A
 
Protein sequence
MKFKVIALAA LMGISGMAAQ ANELPDGPHI VTSGTASVDA VPDIATLAIE VNVAAKDAAT 
AKKQADERVA QYISFLELNQ IAKKDISSAN LRTQPDYDYQ DGKSILKGYR AVRTVEVTLR
QLDKLNSLLD GALKAGLNEI RSVSLGVAQP DAYKDKARKA AIDNAIHQAQ ELANGFHRKL
GPVYSVRYHV SNYQPSPMVR MMKADAAPVS AQETYEQAAI QFDDQVDVVF QLEPVDQQPA
KTPAAQ