Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3046 |
Symbol | serA |
ID | 6147285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3134956 |
End bp | 3136188 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641617915 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_001745066 |
Protein GI | 170683573 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000364512 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGG TATCGCTGGA GAAAGACAAG ATTAAGTTTC TGCTGGTAGA AGGCGTGCAC CAAAAGGCGC TTGAAAGCCT TCGTGCAGCG GGTTACACCA ACATCGAATT TCACAAAGGC GCGCTGGATG ATGAACAATT AAAAGAATCC ATCCGCGATG CCCACTTCAT CGGCCTGCGA TCCCGTACCC ATCTGACTGA AGACGTGATC AACGCCGCAG AAAAACTGGT CGCTATTGGC TGTTTCTGTA TCGGAACAAA CCAGGTTGAT CTGGATGCGG CGGCAAAACG CGGGATCCCG GTATTTAACG CACCGTTCTC AAATACGCGC TCTGTTGCGG AGCTGGTGAT TGGCGAACTG CTGCTGCTAT TGCGCGGCGT GCCGGAAGCC AATGCTAAAG CGCACCGTGG CGTGTGGAAC AAACTGGCGG CGGGTTCTTT TGAAGCGCGC GGCAAAAAGC TGGGTATCAT CGGCTACGGT CATATTGGTA CGCAATTGGG CATTCTGGCT GAATCGCTGG GAATGTATGT TTACTTTTAT GATATTGAAA ACAAACTGCC GCTGGGCAAC GCCACTCAGG TACAGCATCT TTCTGACCTG CTGAATATGA GCGATGTGGT GAGTCTGCAT GTACCAGAGA ATCCGTCCAC CAAAAATATG ATGGGTGCGA AAGAGATTTC ACTAATGAAG CCCGGCTCGC TGCTGATTAA TGCTTCGCGC GGTACTGTGG TGGATATTCC GGCGCTGTGT GACGCGCTGG CGAGCAAACA TCTGGCGGGG GCGGCAATCG ACGTATTTCC GACGGAACCG GCAACCAATA GCGATCCATT TACCTCTCCG CTGTGTGAAT TCGACAACGT CCTTCTGACG CCACACATTG GCGGTTCGAC TCAGGAAGCG CAGGAGAATA TCGGCCTGGA AGTTGCGGGT AAATTGATCA AGTATTCTGA CAATGGCTCA ACGCTCTCTG CGGTGAACTT CCCGGAAGTC TCGCTGCCAC TGCACGGTGG GCGTCGTCTG ATGCACATCC ACGAAAACCG TCCGGGCGTG TTAACTGCGC TGAACAAAAT CTTCGCCGAG CAGGGCGTCA ACATCGCTGC CCAGTATCTG CAAACCTCTG CGCAAATGGG TTATGTAGTT ATTGATATTG AAGCCGACGA AGACGTTGCC GAAAAAGCGC TGCAGGCAAT GAAAGCTATT CCGGGTACCA TTCGCGCCCG TCTGCTGTAC TAA
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Protein sequence | MAKVSLEKDK IKFLLVEGVH QKALESLRAA GYTNIEFHKG ALDDEQLKES IRDAHFIGLR SRTHLTEDVI NAAEKLVAIG CFCIGTNQVD LDAAAKRGIP VFNAPFSNTR SVAELVIGEL LLLLRGVPEA NAKAHRGVWN KLAAGSFEAR GKKLGIIGYG HIGTQLGILA ESLGMYVYFY DIENKLPLGN ATQVQHLSDL LNMSDVVSLH VPENPSTKNM MGAKEISLMK PGSLLINASR GTVVDIPALC DALASKHLAG AAIDVFPTEP ATNSDPFTSP LCEFDNVLLT PHIGGSTQEA QENIGLEVAG KLIKYSDNGS TLSAVNFPEV SLPLHGGRRL MHIHENRPGV LTALNKIFAE QGVNIAAQYL QTSAQMGYVV IDIEADEDVA EKALQAMKAI PGTIRARLLY
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