| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3027 |
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| Symbol | xerD |
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| ID | 6146839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3117647 |
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| End bp | 3118543 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617896 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001745047 |
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| Protein GI | 170681991 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACAGG ATCTGGCACG CATCGAGCAG TTTCTTGATG CTCTGTGGCT GGAAAAAAAT
CTGGCTGAAA ATACGTTGAA CGCATACCGT CGCGATCTGT CAATGATGGT GGAGTGGTTG
CATCACCGCG GGTTGACGCT GGCGACGGCG CAAAGTGACG ATTTGCAGGC ATTACTGGCA
GAAAGGCTGG AGGGCGGGTA TAAAGCCACC AGCTCAGCGC GTTTGCTGAG TGCAGTGCGC
CGATTGTTCC AGTATCTTTA TCGCGAAAAG TTTCGTGAAG ACGATCCCAG TGCGCATCTC
GCTTCACCGA AATTGCCCCA GCGTTTGCCA AAAGATTTAA GCGAAGCGCA GGTCGAACGT
TTATTGCAGG CACCATTAAT TGATCAGCCA CTGGAGCTAC GCGATAAAGC CATGCTTGAA
GTGTTGTATG CTACCGGACT GCGTGTCTCT GAACTGGTCG GGCTGACAAT GAGTGATATC
AGCCTGCGTC AGGGCGTAGT GCGGGTCATT GGTAAAGGCA ACAAAGAGCG CCTGGTGCCG
TTAGGTGAAG AGGCGGTTTA CTGGCTGGAA ACCTATCTGG AACATGGGCG TCCGTGGCTG
CTGAATGGTG TGTCAATTGA CGTGTTGTTT CCCAGCCAGC GTGCGCAGCA GATGACGCGA
CAGACCTTCT GGCACCGCAT TAAACATTAT GCCGTGCTGG CGGGTATCGA CAGCGAAAAG
CTGTCACCGC ATGTGTTGCG TCACGCTTTT GCCACTCACT TATTAAATCA TGGTGCGGAT
TTACGCGTGG TGCAGATGCT ACTGGGCCAC AGCGATCTCT CCACCACGCA AATTTATACG
CATGTCGCTA CCGAGCGTCT GCGGCAACTT CATCAACAGC ATCACCCGCG GGCGTGA
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| Protein sequence | MKQDLARIEQ FLDALWLEKN LAENTLNAYR RDLSMMVEWL HHRGLTLATA QSDDLQALLA
ERLEGGYKAT SSARLLSAVR RLFQYLYREK FREDDPSAHL ASPKLPQRLP KDLSEAQVER
LLQAPLIDQP LELRDKAMLE VLYATGLRVS ELVGLTMSDI SLRQGVVRVI GKGNKERLVP
LGEEAVYWLE TYLEHGRPWL LNGVSIDVLF PSQRAQQMTR QTFWHRIKHY AVLAGIDSEK
LSPHVLRHAF ATHLLNHGAD LRVVQMLLGH SDLSTTQIYT HVATERLRQL HQQHHPRA
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