| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3005 |
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| Symbol | |
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| ID | 6145245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3087745 |
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| End bp | 3088956 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641617874 |
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| Product | peptidase |
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| Protein accession | YP_001745025 |
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| Protein GI | 170684131 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR03320] M20/DapE family protein YgeY
[TIGR03526] putative selenium metabolism hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGA ATATTCCATT CAAACTGATT CTTGAAAAAG CAAAAGATTA CCAGGCGGAC
ATGACTCGCT TCCTGCGCGA CATGGTTGCT ATTCCCAGTG AAAGCTGCGA CGAAAAACGC
GTAGTACATC GTATTAAAGA AGAGATGGAA AAAGTCGGCT TCGATAAAGT TGAAATCGAC
CCGATGGGCA ACGTTCTCGG TTATATCGGC CACGGCCCGC GTCTGGTGGC AATGGACGCT
CATATTGATA CCGTCGGCAT TGGCAACATC AAAAACTGGG ACTTCGATCC GTACGAAGGC
ATGGAAACTG ATGAGCTGAT CGGTGGTCGC GGTACTTCCG ACCAGGAAGG CGGCATGGCA
TCTATGGTTT ATGCCGGTAA AATCATTAAA GACCTCGGTC TGGAAGATGA ATATACCCTG
CTGGTTACCG GTACTGTGCA GGAAGAAGAC TGCGACGGTC TGTGCTGGCA GTACATTATT
GAACAATCCG GCATTCGCCC GGAATTTGTG GTCAGTACCG AACCAACCGA CTGCCAGGTA
TACCGTGGTC AGCGCGGTCG TATGGAAATT CGTATTGATG TTCAGGGTGT TAGCTGCCAC
GGTTCTGCGC CAGAACGCGG TGACAACGCC ATTTTCAAAA TGGGTCCGAT TCTTGGCGAA
TTACAAGAAC TCTCCCAACG TCTGGGTTAT GACGAATTCC TCGGCAAAGG CACCCTCACC
GTTTCTGAAA TCTTCTTCAC ATCCCCAAGC CGTTGCGCTG TAGCAGATAG CTGCGCCGTC
TCTATTGACC GCCGTCTGAC CTGGGGCGAA ACCTGGGAAG GCGCGCTGGA CGAAATCCGC
GCCCTGCCTG CAGTACAGAA AGCTAACGCG GTTGTTTCTA TGTACAACTA CGACCGTCCG
TCCTGGACTG GCCTGGTTTA CCCAACCGAA TGCTACTTCC CGACCTGGAA AGTGGAAGAA
GATCACTTCA CCGTTAAAGC ACTGGTGAAT GCCTACGAAG GTCTGTTTGG CAAAGCGCCG
GTTGTTGATA AGTGGACCTT CTCAACTAAC GGCGTATCTA TCATGGGCCG TCACGGCATT
CCGGTGATCG GCTTTGGCCC AGGTAAAGAA CCTGAAGCGC ATGCACCTAA CGAAAAAACC
TGGAAATCTC ACCTGGTGAC CTGTGCCGCG ATGTACGCGG CAATCCCGTT AAGCTGGCTG
GCAACCGAAT AA
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| Protein sequence | MAKNIPFKLI LEKAKDYQAD MTRFLRDMVA IPSESCDEKR VVHRIKEEME KVGFDKVEID
PMGNVLGYIG HGPRLVAMDA HIDTVGIGNI KNWDFDPYEG METDELIGGR GTSDQEGGMA
SMVYAGKIIK DLGLEDEYTL LVTGTVQEED CDGLCWQYII EQSGIRPEFV VSTEPTDCQV
YRGQRGRMEI RIDVQGVSCH GSAPERGDNA IFKMGPILGE LQELSQRLGY DEFLGKGTLT
VSEIFFTSPS RCAVADSCAV SIDRRLTWGE TWEGALDEIR ALPAVQKANA VVSMYNYDRP
SWTGLVYPTE CYFPTWKVEE DHFTVKALVN AYEGLFGKAP VVDKWTFSTN GVSIMGRHGI
PVIGFGPGKE PEAHAPNEKT WKSHLVTCAA MYAAIPLSWL ATE
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