| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3001 |
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| Symbol | xdhC |
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| ID | 6146237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3082469 |
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| End bp | 3082948 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641617870 |
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| Product | xanthine dehydrogenase subunit XdhC |
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| Protein accession | YP_001745021 |
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| Protein GI | 170681118 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.916998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCACA GCGAAACAAT CACCATCGAA TGCACCATTA ACGGGATGCC TTTTCAGCTT
CACGCCGCAC CAGGCACGCC GCTCTCGGAA TTACTCCGCG AACAAGGACT GCTAAGTGTC
AAACAAGGGT GCTGCGTGGG TGAATGTGGT GCCTGTACGG TGCTGGTCGA CGGCACAGCA
ATAGACAGTT GCTTATACCT TGCCGCCTGG GCTGAAGGAA AAGAGATCCG CACGCTGGAA
GGTGAAGCGA AAGGCGGAAA ACTTTCTCAT GTACAGCAGG CTTATGCTAA ATCCGGCGCA
GTGCAGTGCG GGTTTTGTAC GCCTGGCCTG ATTATGGCTA CCACAGCAAT GCTGGCGAAA
CCACGCGAGA AGCCATTAAC CATTACGGAA ATTCGTCGCG GACTGGCGGG AAATCTTTGT
CGCTGCACGG GGTATCAGAT GATTGTAAAT ACAGTTCTGG ATTGCGAGAA AACGAAGTAA
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| Protein sequence | MNHSETITIE CTINGMPFQL HAAPGTPLSE LLREQGLLSV KQGCCVGECG ACTVLVDGTA
IDSCLYLAAW AEGKEIRTLE GEAKGGKLSH VQQAYAKSGA VQCGFCTPGL IMATTAMLAK
PREKPLTITE IRRGLAGNLC RCTGYQMIVN TVLDCEKTK
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