| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3000 |
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| Symbol | xdhB |
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| ID | 6145759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3081594 |
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| End bp | 3082472 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617869 |
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| Product | xanthine dehydrogenase subunit XdhB |
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| Protein accession | YP_001745020 |
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| Protein GI | 170682040 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATT TTGCTTCTTA CCATCGCGCA GCAACCCTTG CCGATGCCAT CAACCTGCTG
GCTGACAACC CACAGGCCAA ACTGCTCGCC GGTGGCACTG ACGTACTGAT TCAGCTCCAC
CATCACAATG ACCGTTATCG CCATATTGTT GATATTCATA ATCTGGCGGA GCTGCGGGGA
ATTACGCTAG CGGAAGATGG CTCACTACGT ATCGGCTCTG CAACGACATT TACCCAGCTC
ATTGAAGATC CTGTAACTCA ACGTCATCTC CCAGCGTTAT GTGCTGCGGC CTCGTCCATT
GCCGGACCGC AGATCCGTAA CGTCGCTACC TACGGTGGAA ATATTTGCAA CGGTGCTACC
AGTGCAGATT CTGCCACGCC AACGCTAATT TATGACGCGA AACTGGAGAT TCACTCCCCG
CGCGGTGTTC GTTTCGTCCC GATTAATGGC TTTCACACTG GGCCGGGCAA AGTGTCTCTT
GAGCATGACG AAATCCTTGT CGCCTTTCAT TTTCCGCCCC AGCCGAAAGA ACACGCGGGC
AGCGCGCATT TTAAATATGC CATGCGCGAC GCAATGGATA TTTCAACGAT TGGCTGCGCC
GCACATTGCC GACTGGATAA CGGCAATTTC AGCGAATTAC GCCTGGCATT TGGTGTTGCC
GCGCCAACGC CAATTCGCTG CCAACATGCC GAACAGACTG CACAAAATGC GCCATTAAAC
CTGCAAACAC TGGAAGCCAT CAGCGAATCA GTCCTGCAAG ATGTCGCCCC GCGTTCTTCA
TGGCGGGCCA GTAAAGAGTT TCGTCTGCAT CTCATCCAGA CGATGACCAA AAAAGTGATT
AGCGAAGCCG TCGCCGCGGC GGGGGGAAAA TTGCAATGA
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| Protein sequence | MFDFASYHRA ATLADAINLL ADNPQAKLLA GGTDVLIQLH HHNDRYRHIV DIHNLAELRG
ITLAEDGSLR IGSATTFTQL IEDPVTQRHL PALCAAASSI AGPQIRNVAT YGGNICNGAT
SADSATPTLI YDAKLEIHSP RGVRFVPING FHTGPGKVSL EHDEILVAFH FPPQPKEHAG
SAHFKYAMRD AMDISTIGCA AHCRLDNGNF SELRLAFGVA APTPIRCQHA EQTAQNAPLN
LQTLEAISES VLQDVAPRSS WRASKEFRLH LIQTMTKKVI SEAVAAAGGK LQ
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