| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2999 |
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| Symbol | xdhA |
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| ID | 6147376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3079286 |
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| End bp | 3081583 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617868 |
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| Product | xanthine dehydrogenase subunit XdhA |
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| Protein accession | YP_001745019 |
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| Protein GI | 170681574 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.821055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGC GGGAAGCAAC CGCTACGGGT GAATCTTGCA TGCGCGTCGA TGCCATTGCT
AAGGTCACCG GGCGGGCACG ATATACTGAC GATTATGTTA TGGCGGGCAT GTGTTACGCG
AAATATGTAC GTAGCCCTAT CGCACATGGT TATGCCGTAA GTATTAATGA TGAACAAGCC
AGAAGTTTAC CAGGCGTACT GGCGATTTTT ACCTGGGAAG ATGTACCTGA TATCCCATTC
GCTACAGCTG GGCATGCCTG GACACTTGAC GAAAACAAGC GCGATACCGC CGATCGCGCA
CTGCTAACTC GCCATGTTCG TCATCATGGT GACGCCGTTG CCATCGTCGT GGCCCGTGAT
GAACTCACGG CAGAAAAAGC GGCGCAATTG GTCAGCATTG AGTGGCAAGA ATTACCCGTT
ATCACCACGC CAGAAGCGGC GCTGGCAGAT GACGCTGCAC CAATCCATAA CGGCGGCAAT
TTACTAAAAC AAAGCTCGAT GTCGACGGGT AATGTCCAAC AAACAATCGA TGCCGTCGAT
TACCAGGTGC AGGGGCACTA TCAGACGCCG GTCATTCAAC ATTGTCACAT GGAAAGCGTG
ACATCGCTGG CATGGATGGA GGATGACTCG CGAATTACCA TCGTTTCCAG CACCCAGATC
CCGCACATTG TTCGCCGTGT GGTTGGTCAG GCGCTGAATA TTCCCTGGTC ATGCGTACGA
GTCATCAAAC CGTTTGTCGG TGGCGGTTTT GGTAATAAAC AGGATGTACT GGAAGAGCCA
ATGGCGGCAT TCCTGACCAG CAAGCTTGGC GGCATTCCGG TGAAAGTTTC CCTTAGCCGT
GAAGAGTGTT TCCTCGCAAC CCGTACCCGC CACGCTTTTA CTATTGACGG GCAAATGGGC
GTGAACCGCG ACGGAACATT GAAAGGTTAT AGTCTGGATG TTCTGTCTAA CACCGGCGCT
TATGCATCTC ACGGGCACTC CATCGCTTCT GCAGGGGGGA ATAAAGTCGC TTACCTTTAT
CCTCGTTGTG CCTACGCTTA CAGTTCAAAG ACCTGCTATA CCAACCTCCC CTCGGCTGGT
GCGATGCGTG GTTATGGCGC GCCACAAGTC GTATTTGCCG TTGAGTCTAT GCTTGATGAC
GCCGCGACAG CGTTAGGTAT TGATCCTGTT GAAATTCGTT TACGCAACGC CGCCCGCGAA
GGAGATGCTA ATCCGCTCAC AGGCAAACGT ATTTACAGCG CAGGGTTGCC GGAGTGTCTT
GAAAAAGGCC GGAAAATCTT TGAATGGGAA AAACGCCGTG CAGAGTGCCA GAACCAGCAA
GGCAATTTAC GCCGCGGCGT TGGCGTCGCC TGTTTTAGCT ACACCTCTAA CACCTGGCCT
GTCGGCGTAG AAATTGCTGG CGCGCGCCTG TTGATGAATC AGGATGGAAC CATCAACGTA
CAGAGTGGTG CCACGGAAAT CGGCCAGGGT GCCGACACCG TGTTCTCGCA AATGGTGGCA
GAAACCGTGG GGGTTCCGGT CAGCGACATT CGCGTTATTT CAACACAAGA TACCGACGTT
ACGCCGTTCG ATCCCGGCGC ATTTGCCTCA CGCCAGAGCT ATGTTGCCGC GCCCGCGCTA
CGCAGTGCGG CACTGTTATT AAAGGAGAAA ATCATCGCTC ACGCCGCTGT CATGCTACAT
CAGTCAGCGA TGAATCTTAC CTTGATAAAA GGCCATATCG TGCTGGTTGA ACGACCGGAA
GAGCCGTTAA TGTCGTTAAA AGATTTGGCG ATGGATGCCT TCTACCACCC TGAACGCGGC
GGGCAGCTCT CTGCCGAAAG CTCCATCAAA ACCACCACTA ACCCACCAGC GTTTGGCTGT
ACCTTTGTTG ATCTGACGAT CGATATTGCG CTGTGCAAAG TCACCATCAA CCGCATCCTT
AACGTTCATG ATTCGGGCCA TATTCTTAAT CCGTTGCTGG CAGAAGGTCA GGTACACGGC
GGAATGGGAA TGGGCATTGG CTGGGCGCTA TTTGAAGAGA TGATCATCGA TGCGAAAAGC
GGCGTGGTCC GTAACCCCAA TCTGCTGGAT TACAAAATGC CCACCATGCC GGATCTGCCA
CAACTGGAAA GCGCGTTCGT CGAAATCAAT GAGCCGCAAT CCGCATACGG ACATAAGTCA
CTGGGTGAGC CACCAATAAT TCCTGTTGCC GCTGCTATTC GTAACGCGGT GAAGATGGCT
ACCGGTGTTG CAATCAATAC ACTGCCGCTG ACGCCAAAAC GGTTATATGA AGAGTTCCAT
CTGGCAGGAT TGATTTGA
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| Protein sequence | MEAREATATG ESCMRVDAIA KVTGRARYTD DYVMAGMCYA KYVRSPIAHG YAVSINDEQA
RSLPGVLAIF TWEDVPDIPF ATAGHAWTLD ENKRDTADRA LLTRHVRHHG DAVAIVVARD
ELTAEKAAQL VSIEWQELPV ITTPEAALAD DAAPIHNGGN LLKQSSMSTG NVQQTIDAVD
YQVQGHYQTP VIQHCHMESV TSLAWMEDDS RITIVSSTQI PHIVRRVVGQ ALNIPWSCVR
VIKPFVGGGF GNKQDVLEEP MAAFLTSKLG GIPVKVSLSR EECFLATRTR HAFTIDGQMG
VNRDGTLKGY SLDVLSNTGA YASHGHSIAS AGGNKVAYLY PRCAYAYSSK TCYTNLPSAG
AMRGYGAPQV VFAVESMLDD AATALGIDPV EIRLRNAARE GDANPLTGKR IYSAGLPECL
EKGRKIFEWE KRRAECQNQQ GNLRRGVGVA CFSYTSNTWP VGVEIAGARL LMNQDGTINV
QSGATEIGQG ADTVFSQMVA ETVGVPVSDI RVISTQDTDV TPFDPGAFAS RQSYVAAPAL
RSAALLLKEK IIAHAAVMLH QSAMNLTLIK GHIVLVERPE EPLMSLKDLA MDAFYHPERG
GQLSAESSIK TTTNPPAFGC TFVDLTIDIA LCKVTINRIL NVHDSGHILN PLLAEGQVHG
GMGMGIGWAL FEEMIIDAKS GVVRNPNLLD YKMPTMPDLP QLESAFVEIN EPQSAYGHKS
LGEPPIIPVA AAIRNAVKMA TGVAINTLPL TPKRLYEEFH LAGLI
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