Gene EcSMS35_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2998 
Symbol 
ID6143690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3078118 
End bp3078870 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content51% 
IMG OID641617867 
ProductM23B family peptidase 
Protein accessionYP_001745018 
Protein GI170683156 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.310031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTGCGG GACGCCTGAA TAAAAAATCT CTGGGTATCG TGATGTTGTT ATCGGTTGGA 
CTGCTTTTGG CGGGCTGCTC GGGTAGCAAA TCATCCGATA CAGGAACGTA TTCCGGCTCC
GTTTACACCG TGAAACGGGG GGATACGCTA TATCGTATTT CGCGCACCAC GGGAACCAGC
GTAAAAGAGC TGGCGCGACT GAACGGCATT TCCCCCCCTT ACACCATTGA AGTTGGTCAG
AAACTAAAAC TGGGTGGGGC GAAAAGTAGC AGTACACGTA AATCAACCGC CAAATCAACG
ACCAAAACCG CATCGGTTAC ACCGTCATCA GCAGTACCGA AATCTTCCTG GCCGCCAGTA
GGGCAACGTT GTTGGTTATG GCCAACGACA GGGAAAGTTA TCATGCCGTA TTCGACAGCT
GATGGCGGCA ATAAAGGGAT TGATATCTCA GCTCCACGGG GTACACCTAT TTACGCCGCG
GGTGCAGGAA AGGTGGTGTA TGTGGGCAAC CAGCTGCGTG GCTACGGTAA TCTCATCATG
ATTAAACACA GTGAAGATTA CATTACGGCT TACGCCCATA ATGACACGAT GCTGGTAAAT
AATGGGCAAA GCGTGAAGGC TGGGCAAAAA ATCGCCACTA TGGGGAGCAC TGATGCGGCA
TCGGTTCGCC TGCATTTCCA GATTCGTTAC CGTGCTACGG CAATTGATCC GCTGCGTTAC
TTGCCGCCTC AGAGCAGCAA GCCAAAATGC TGA
 
Protein sequence
MSAGRLNKKS LGIVMLLSVG LLLAGCSGSK SSDTGTYSGS VYTVKRGDTL YRISRTTGTS 
VKELARLNGI SPPYTIEVGQ KLKLGGAKSS STRKSTAKST TKTASVTPSS AVPKSSWPPV
GQRCWLWPTT GKVIMPYSTA DGGNKGIDIS APRGTPIYAA GAGKVVYVGN QLRGYGNLIM
IKHSEDYITA YAHNDTMLVN NGQSVKAGQK IATMGSTDAA SVRLHFQIRY RATAIDPLRY
LPPQSSKPKC