Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2987 |
Symbol | |
ID | 6146229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3068576 |
End bp | 3069268 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641617857 |
Product | putative racemase |
Protein accession | YP_001745009 |
Protein GI | 170681384 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0674464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA TTGGTTTGCT GGGAGGAATG AGCTGGGAAT CCACCATTCC TTACTATCGT TTGATAAATG AAGGTATTAA ACAGCGGCTT GGTGGGCTTC ACTCTGCGCA AGTGCTGCTA CATAGCGTCG ATTTTCATGA AATAGAAGAG TGCCAGCGTC GCGGTGAGTG GGACAAAACC GGGGATATTC TGGCTGAGGC GGCGCTTGGC TTACAGCGGG CGGGCGCAGA AGGTATTGTG TTATGTACCA ATACGATGCA CAAAGTGGCG GATGCCATTG AGTCTCGTTG CTCTCTGCCT TTCTTACACA TAGCGGATGC CACTGGACGT GCAATTATCC GGGCTGGAAT GACTCGTGTG GCGCTGCTGG GTACGCGTTA CACCATGGAA CAGGATTTTT ATCGCGGGCG GCTGACGGAA CAATTTTCCA TCAACTGTCT CATTCCTGAA GCGGATGAAC GGGCGAAAAT TAATCAGATT ATTTTTGAAG AACTGTGTCT GGGGCAATTT ACCGAAGCGT CACGCACTTA TTATGCGCAA GTGATTGCTC GCCTTGCAGA ACAGGGCGCA CAGGGCGTTA TTTTTGGCTG CACAGAAATT GGTTTACTGG TGCCAGAAGA GCGCAGTGTT CTGCCTGTGT TTGATACCGC GGCGATCCAT GCCGAGGATG CTGTCGCTTT TATGCTGTCG TAG
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Protein sequence | MKTIGLLGGM SWESTIPYYR LINEGIKQRL GGLHSAQVLL HSVDFHEIEE CQRRGEWDKT GDILAEAALG LQRAGAEGIV LCTNTMHKVA DAIESRCSLP FLHIADATGR AIIRAGMTRV ALLGTRYTME QDFYRGRLTE QFSINCLIPE ADERAKINQI IFEELCLGQF TEASRTYYAQ VIARLAEQGA QGVIFGCTEI GLLVPEERSV LPVFDTAAIH AEDAVAFMLS
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