Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2983 |
Symbol | lplT |
ID | 6145358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3061301 |
End bp | 3062494 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641617852 |
Product | lysophospholipid transporter LplT |
Protein accession | YP_001745004 |
Protein GI | 170683196 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0384881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.021461 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGT CAGTGCACAC TAACACTTCG TTGTGGTCGA AGGGGATGAA AGCGGTTATC GTGGCGCAGT TTCTCTCTGC GTTTGGCGAT AATGCACTAC TGTTTGCCAC TCTAGCGCTA CTGAAAGCGC AGTTCTATCC GGAGTGGAGC CAGCCCATCC TGCAAATGGT GTTTGTAGGT GCTTACATTC TTTTTGCGCC GTTTGTCGGG CAGGTGGCGG ATAGCTTCGC CAAAGGCCGG GTGATGATGT TTGCCAACGG CCTGAAGCTG CTGGGCGCAG CCAGTATCTG CTTTGGTATC AATCCGTTTC TCGGCTATAC GCTGGTGGGT GTTGGTGCTG CAGCCTATTC ACCGGCGAAA TACGGTATTC TCGGCGAATT AACCACGGGT AGTAAGTTAG TGAAAGCTAA CGGTTTAATG GAAGCTTCTA CCATAGCGGC GATTTTGCTC GGTTCCGTAG CCGGTGGTGT ACTGGCTGAC TGGCATGTCC TGGTCGCCCT GGCCGCATGC GCACTGGCCT ACGGTGGTGC GGTCGTTGCC AATATCTACA TTCCCAAACT GGCGGCGGCG CGTCCGGGGC AGTCCTGGAA TCTCATCAAC ATGACCCGCA GTTTCCTGAA TGCCTGCACC TCGCTATGGC GCAATGGTGA AACGCGTTTT TCGCTGGTGG GCACCAGTTT ATTCTGGGGA GCAGGTGTCA CGCTGCGTTT CCTGTTGGTG CTGTGGGTAC CGGTGGCGCT GGGCATTACC GATAACGCTA CGCCGACCTA TCTCAACGCG ATGGTAGCGA TTGGTATCGT GGTTGGCGCT GGTGCGGCAG CGAAGTTAGT TACGCTGGAA ACCGTGTCAC GCTGTATGCC AGCCGGGATT TTGATTGGCG TGGTGGTACT GATTTTCTCC CTGCAACACG AGCTGCTGCC AGCCTATGCC TTGTTGATGC TGATTGGCGT GCTGGGGGGC TTTTTTGTCG TTCCGCTCAA TGCGTTGCTA CAGGAACGGG GTAAAAAAAG CGTCGGGGCG GGGAATGCAA TTGCAGTACA AAACCTTGGC GAAAACAGCG CCATGTTGTT GATGCTGGGC ATTTACTCGC TGGCGGTAAT GGTAGGCATC CCGGTCGTGC CCATTGGCAT TGGCTTCGGT GCGCTGTTTG CGCTGGCAAT AACGGCGCTG TGGATCTGGC AGCGCCGTCA TTAA
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Protein sequence | MSESVHTNTS LWSKGMKAVI VAQFLSAFGD NALLFATLAL LKAQFYPEWS QPILQMVFVG AYILFAPFVG QVADSFAKGR VMMFANGLKL LGAASICFGI NPFLGYTLVG VGAAAYSPAK YGILGELTTG SKLVKANGLM EASTIAAILL GSVAGGVLAD WHVLVALAAC ALAYGGAVVA NIYIPKLAAA RPGQSWNLIN MTRSFLNACT SLWRNGETRF SLVGTSLFWG AGVTLRFLLV LWVPVALGIT DNATPTYLNA MVAIGIVVGA GAAAKLVTLE TVSRCMPAGI LIGVVVLIFS LQHELLPAYA LLMLIGVLGG FFVVPLNALL QERGKKSVGA GNAIAVQNLG ENSAMLLMLG IYSLAVMVGI PVVPIGIGFG ALFALAITAL WIWQRRH
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