| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2980 |
|---|
| Symbol | |
|---|
| ID | 6145122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3059052 |
|---|
| End bp | 3059765 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641617849 |
|---|
| Product | TerC family integral membrane protein |
|---|
| Protein accession | YP_001745001 |
|---|
| Protein GI | 170681603 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000029602 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.0103566 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTTG CATGGATAAC CGATCCTAAC GCCTGGCTTG CGCTCGGTAC GCTGACGCTG
CTGGAGATCG TTCTTGGGAT CGACAATATT ATTTTCCTTT CTCTGGTGGT GGCAAAGCTC
CCCACAGCAC AACGTGCTCA TGCGCGCCGT CTGGGGTTGG CGGGAGCCAT GGTTATGCGT
CTGGCGCTGC TGGCATCCAT CGCCTGGGTT ACGCGCCTGA CAAATCCGCT TTTTACAATA
TTCAGCCAGG AAATTTCCGC CCGTGATTTG ATTCTGCTTC TGGGTGGCTT GTTCCTTATC
TGGAAAGCCA GCAAGGAAAT CCACGAATCC ATTGAAGGTG AAGAAGAAGG GCTGAAAACA
CGCGTTTCAT CATTCCTCGG CGCTATCGTG CAGATTATGC TGCTGGATAT TATCTTCAGC
CTCGACTCGG TGATTACCGC TGTGGGTCTG TCAGATCACC TGTTTATTAT GATGGCCGCC
GTGGTGATTG CCGTAGGCGT GATGATGTTC GCCGCACGCT CGATTGGTGA TTTTGTCGAA
CGCCATCCTT CGGTAAAAAT GCTGGCGCTC TCTTTCCTGA TTCTGGTGGG CTTTACCTTG
ATTCTGGAAA GTTTCGACAT CCACGTACCG AAAGGTTACA TCTACTTCGC GATGTTCTTC
TCTATTGCGG TTGAAAGCCT CAACCTGATT CGCAACAAAA AGAACCCGCT CTGA
|
|---|
| Protein sequence | MLFAWITDPN AWLALGTLTL LEIVLGIDNI IFLSLVVAKL PTAQRAHARR LGLAGAMVMR
LALLASIAWV TRLTNPLFTI FSQEISARDL ILLLGGLFLI WKASKEIHES IEGEEEGLKT
RVSSFLGAIV QIMLLDIIFS LDSVITAVGL SDHLFIMMAA VVIAVGVMMF AARSIGDFVE
RHPSVKMLAL SFLILVGFTL ILESFDIHVP KGYIYFAMFF SIAVESLNLI RNKKNPL
|
|---|
| |