Gene EcSMS35_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2978 
Symbol 
ID6146462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3058054 
End bp3058215 
Gene Length162 bp 
Protein Length53 aa 
Translation table11 
GC content40% 
IMG OID641617847 
Producthypothetical protein 
Protein accessionYP_001744999 
Protein GI170681598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000255282 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00308446 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAACAG TAGTGGAGGT TTTTCACAGT TATCCCAGCT TTCTGTGGAT AACATGGTGT 
AAGATCCTGT TTATTTTCAG TGACCAGATT TGGAAAACCC ATTGCAGTGT TGCGCAACTC
GATTACCGGC AACCTAAAAA GCAATATAAA TCAGAGAATT GA
 
Protein sequence
METVVEVFHS YPSFLWITWC KILFIFSDQI WKTHCSVAQL DYRQPKKQYK SEN