Gene EcSMS35_2969 details

Gene Information

• Locus tag: EcSMS35_2969
• Symbol: recC
• ID: 6146657
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli SMS-3-5
• Kingdom: Bacteria
• Replicon accession: NC_010498
• Strand: -
• Start bp: 3047691
• End bp: 3051059
• Gene Length: 3369 bp
• Protein Length: 1122 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641617838
• Product: exonuclease V subunit gamma
• Protein accession: YP_001744990
• Protein GI: 170683034
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1330] Exonuclease V gamma subunit
• TIGRFAM ID: [TIGR01450] exodeoxyribonuclease V, gamma subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.481674
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 0.0228423
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTAAGGG TCTACCATTC CAATCGTCTG GACGTGCTGG AAGCGTTGAT GGAGTTTATT 
GTCGAACGCG AACGGCTGGA CGATCCTTTC GAACCAGAGA TGATTCTGGT GCAAAGTACC 
GGTATGGCGC AGTGGCTGCA AATGACCCTG TCGCAAAAGT TTGGTATTGC GGCAAACATT 
GATTTTCCGC TGCCAGCGAG CTTTATCTGG GATATGTTCG TCCGGGTGTT ACCGGAAATC 
CCCAAAGAGA GCGCCTTTAA CAAACAGAGC ATGAGCTGGA AACTGATGAC TCTGCTGCCG 
CAACTGTTGG AGCGCGAAGA CTTTACCCTG TTGCGGCATT ATCTGACTGA CGATAGTGAC 
AAGCGAAAAC TGTTCCAGCT TTCTTCAAAA GCGGCGGACC TGTTTGACCA GTATCTGGTC 
TATCGTCTGG ACTGGCTGGC ACAGTGGGAA ACAGGACATC TGGTAGAAGG GTTGGGAGAA 
GCACAGGCCT GGCAAGCGCC GTTGTGGAAG GCGTTGGTGG AATATACCGA CGAACTCGGG 
CAACCGCGCT GGCACCGCGC CAATCTCTAT CAGCGCTTTA TCGAAACGCT GGAGTCCGCG 
ACGACCTGCC CGCCGGGGCT ACCTTCGCGC GTCTTTATAT GCGGTATTTC CGCGTTACCG 
CCTGTTTATC TCCAGGCGCT ACAGGCGCTG GGTAAACATA TTGAAATCCA TCTCCTGTTT 
ACCAACCCCT GCCGTTATTA CTGGGGCGAC ATTAAAGATC CTGCTTATCT GGCGAAACTG 
CTGACTCGCC AGCGCCGACA CAGTTTTGAA GATCGCGAAT TACCGTTATT TCGCGACAGC 
GAAAATGCCG GACAGCTCTT TAACAGCGAT GGTGAACAGG ATGTCGGTAA CCCGCTGCTG 
GCCTCATGGG GCAAGCTTGG GCGCGACTAC ATTTATCTTC TTTCTGACCT GGAGGGCAGC 
CAGGAGCTGG ACGCTTTTGT CGATGTGACG CCAGACAACC TGCTGCATAA CATTCAGTCT 
GACATTCTGG AACTGGAAAA CCGCGCCGTT GCGGGTGTGA ACATCGAAGA GTTTTCCCGT 
AGCGATAACA AACGCCCGCT TGATCCACTG GATAGCAGTA TCACCTTCCA CGTTTGCCAT 
AGCCCGCAGC GTGAAGTTGA AGTTTTACAC GATCGCTTGC TGGCGATGCT GGAGGAAGAC 
CCGACACTTA CTCCGCGCGA CATCATCGTG ATGGTGGCCG ACATCGACAG CTACAGTCCG 
TTTATTCAGG CAGTGTTTGG TAGCGCACCT GCGGATCGTT ACCTGCCTTA CGCCATTTCC 
GACCGTCGTG CGCGGCAGTC ACATCCGGTA CTGGAAGCGT TTATCAGCCT GTTATCACTG 
CCTGACAGTC GCTTTGTGTC AGAGGATGTG CTGGCGCTGC TGGATGTGCC GGTGCTGGCG 
GCGCGGTTTG ACATCACCGA AGAAGGGCTG CGTTATTTAC GTCAGTGGGT CAACGAATCT 
GGCATTCGTT GGGGGATAGA TGACGACAAC GTTCGCGAGC TGGAACTCCC CGCCACCGGA 
CAACACACCT GGCGATTTGG CCTGACGCGT ATGTTACTAG GCTACGCGAT GGAGAGCGCG 
CAGGGCGAGT GGCAATCGGT TCTACCTTAT GATGAATCGA GCGGCTTAAT TGCAGAACTG 
GTGGGGCATC TGGCTTCACT GCTAATGCAG CTAAACATCT GGCGTCGCGG GCTGGCGCAG 
GAGCGTCCGC TGGAAGAGTG GTTGCCGGTT TGTCGCGATA TGCTCAACGC CTTCTTCCTG 
CCGGATGCGG AAACCGAAGC GGCGATGACG CTGATCGAAC AACAATGGCA GGCGATTATC 
GCCGAAGGTT TAGGTGCGCA GTATGGCGAC GCGGTGCCGC TGTCACTATT GCGTGATGAA 
CTGGCACAGC GCCTGGATCA GGAACGTATC AGCCAGCGTT TTCTCGCCGG ACCGGTTAAC 
ATTTGTACTC TGATGCCAAT GCGTTCCATC CCATTCAAAG TGGTTTGCCT GCTGGGAATG 
AACGACGGCG TTTATCCACG CCAGCTTGCG CCATTGGGCT TTGACCTGAT GAGCCAGAAA 
CCGAAGCGTG GCGACCGTAG CCGTCGCGAT GACGACCGCT ATCTGTTCCT GGAAGCGTTA 
ATTTCCGCGC AGCAAAAACT CTATATCAGC TATATCGGGC GTTCTATTCA GGATAACAGT 
GAACGTTTCC CGTCGGTACT GGTGCAGGAA CTGATCGACT ACATCGGGCA AAGCCATTAT 
CTACCGGGCG ATGAAGCGCT CAACTGTGAT GAAAGCGAGG CAAGGGTAAA AGCACATCTT 
ACTTGCCTCC ATACCCGAAT GCCGTTTGAT CCACAAAACT ACCAGCCAGG CGAACGACAA 
AGCTATGCTC GTGAATGGCT ACCCGCGGCC AGCCAGGCTG GTAAAGCACA TTCTGAATTT 
GTTCAGCAGC TGCCGTTTAC CTTACCGGAA ACCGTGCCGC TGGAAACGCT ACAACGATTC 
TGGGCACATC CGGTGCGGGC ATTTTTCCAG ATGCGTTTGC AGGTGAACTT CCGTACCGAA 
GACAGCGAAA TCCCCGACAC CGAGCCATTT ATTCTGGAAG GACTTAGCCG TTATCAAATC 
AATCAGCAGT TATTGAATGC ACTGGTTGAG CAGGATGATG CCGAACGCTT GTTCCGCCGC 
TTCCGGGCGG CAGGGGATTT ACCGTATGGC GCTTTTGGTG AAATTTTCTG GGAAACACAG 
TGCCAGGAGA TGCAGCAGCT TGCCGACAGA GTCATTGCCT GTCGCCAGCC GGGGCAGAGT 
ATGGAAATTG ACCTCGCCTG CAACGGTGTG CAGATAACTG GCTGGTTGCC GCAGGTGCAG 
TCGGATGGCC TGTTGCGCTG GCGTCCCTCT TTATTAAGTG TGGCGCAGGG AATGCAACTT 
TGGCTGGAAC ACCTTGTCTA CTGTGCCAGC GGTGGTAATG GTGAAAGTCG CCTTTTTCTA 
CGCAAAGACG GCGAGTGGCG TTTTCCGCCG CTTGCAGCCG AACAGGCTTT ACATTACCTC 
TCACAGCTGA TTGAAGGGTA TCGTGAAGGA ATGTCCGCGC CATTGCTGGT GTTACCTGAA 
AGTGGCGGCG CGTGGCTAAA AACCTGTTAT GACGCGCAAA ACGATGCCAT GCTGGATGAC 
GATTCCACGT TGCAAAAAGC CCGAACGAAA TTCCTTCAGG CTTACGAAGG CAACATGATG 
GTGCGTGGCG AAGGTGATGA TATCTGGTAT CAACGGCTCT GGCGGCAATT AACACCAGAG 
ACAATGGAGG CCATCGTTGA ACAGTCGCAA CGTTTCCTGT TACCGCTGTT TCGCTTTAAT 
CAGTCATGA 

 

Protein sequence

MLRVYHSNRL DVLEALMEFI VERERLDDPF EPEMILVQST GMAQWLQMTL SQKFGIAANI 
DFPLPASFIW DMFVRVLPEI PKESAFNKQS MSWKLMTLLP QLLEREDFTL LRHYLTDDSD 
KRKLFQLSSK AADLFDQYLV YRLDWLAQWE TGHLVEGLGE AQAWQAPLWK ALVEYTDELG 
QPRWHRANLY QRFIETLESA TTCPPGLPSR VFICGISALP PVYLQALQAL GKHIEIHLLF 
TNPCRYYWGD IKDPAYLAKL LTRQRRHSFE DRELPLFRDS ENAGQLFNSD GEQDVGNPLL 
ASWGKLGRDY IYLLSDLEGS QELDAFVDVT PDNLLHNIQS DILELENRAV AGVNIEEFSR 
SDNKRPLDPL DSSITFHVCH SPQREVEVLH DRLLAMLEED PTLTPRDIIV MVADIDSYSP 
FIQAVFGSAP ADRYLPYAIS DRRARQSHPV LEAFISLLSL PDSRFVSEDV LALLDVPVLA 
ARFDITEEGL RYLRQWVNES GIRWGIDDDN VRELELPATG QHTWRFGLTR MLLGYAMESA 
QGEWQSVLPY DESSGLIAEL VGHLASLLMQ LNIWRRGLAQ ERPLEEWLPV CRDMLNAFFL 
PDAETEAAMT LIEQQWQAII AEGLGAQYGD AVPLSLLRDE LAQRLDQERI SQRFLAGPVN 
ICTLMPMRSI PFKVVCLLGM NDGVYPRQLA PLGFDLMSQK PKRGDRSRRD DDRYLFLEAL 
ISAQQKLYIS YIGRSIQDNS ERFPSVLVQE LIDYIGQSHY LPGDEALNCD ESEARVKAHL 
TCLHTRMPFD PQNYQPGERQ SYAREWLPAA SQAGKAHSEF VQQLPFTLPE TVPLETLQRF 
WAHPVRAFFQ MRLQVNFRTE DSEIPDTEPF ILEGLSRYQI NQQLLNALVE QDDAERLFRR 
FRAAGDLPYG AFGEIFWETQ CQEMQQLADR VIACRQPGQS MEIDLACNGV QITGWLPQVQ 
SDGLLRWRPS LLSVAQGMQL WLEHLVYCAS GGNGESRLFL RKDGEWRFPP LAAEQALHYL 
SQLIEGYREG MSAPLLVLPE SGGAWLKTCY DAQNDAMLDD DSTLQKARTK FLQAYEGNMM 
VRGEGDDIWY QRLWRQLTPE TMEAIVEQSQ RFLLPLFRFN QS