Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2966 |
Symbol | recD |
ID | 6144600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3039266 |
End bp | 3041092 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641617835 |
Product | exonuclease V subunit alpha |
Protein accession | YP_001744987 |
Protein GI | 170683529 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGC AAAAGCAATT ACTGGAAGCT GTGGAGCACA AACAGCTACG CCCGCTGGAC GTGCAGTTTG CCCTGACCGT GGCGGGAGAT GAACATCCTG CCGTCACCCT CGCGGCGGCA CTGTTAAGTC ATGATGCCGG AGAGGGACAC GTTTGTTTGC CGCTTTCACG ACTGGAAAAT AACGAGGCAT CGCATCCGCT GTTGGCGACC TGTGTCAGTG AAATCGGTGA GCTACAAAAT TGGGAAGAAT GCTTGCTGGC TTCACAAGCG GTCAGCCGGG GAGATGAACC AACGCCGATG ATCCTCTGTG GCGATCGTCT TTATTTGAAT CGCATGTGGT GTAACGAGCG CACAGTGGCA CGCTTTTTCA ACGAAGTGAA TCATGCCATT GAGGTTGATG AAGCTCTACT GGCGCAAACC CTGGACAAAC TTTTTCCAGT AAGCGATGAC ATTAACTGGC AAAAAGTGGC GGCGGCAGTG GCGCTGACGC GGCGGATTTC GGTGATTTCC GGCGGTCCTG GCACCGGTAA AACGACCACC GTAGCGAAGT TGCTGGCAGC CTTAATTCAA ATGGCCGACG GAGAACGCTG CCGTATCCGT CTGGCTGCAC CAACGGGTAA AGCTGCCGCG CGCTTAACCG AATCTCTCGG CAAGGCTTTG CGCCAGTTAC CGCTGACCGA TGAACAAAAG AAACGCATTC CGGAAGATGC CAGTACTTTG CACCGATTGC TGGGCGCACA GCCGGGTAGC CAGCGTTTAC GTCATCATGC CGGTAACCCG CTGCATCTTG ATGTGCTGGT AGTAGATGAA GCGTCAATGA TCGATCTGCC GATGATGTCG AGACTGATAG ACGCCTTGCC CGATCATGCG CGAGTGATCT TTCTCGGCGA TCGTGATCAA CTGGCCTCGG TTGAGGCTGG GGCTGTGCTG GGCGATATTT GTGCTTATGC CAATGCCGGC TTTACCGCCG AGCGTGCCGG GCAGCTAAGC CGCCTGACGG GAACTCACAT TCCGTCAGGA ACTGGCACAG AAGCGGCATC TTTGCGCGAC AGTCTCTGCC TGCTGCAAAA AAGCTATCGT TTCGGCAGCG ATTCTGGCAT TGGTCAGTTA GCTGCGGCGA TTAACCGTGG TGATAAAATG GCAGTGAAAA CCGTTTTTCA GCAGGATTTT ACTGATATCG AAAAACGGCT TTTACAGAGC GGCGAAGATT ATATTGCGAT GCTTGAGGAA GCTCTTTCGG GTTACGGACG TTATCTGGAT CTGCTGCAAG CGCGTGCCGA GCCGGATTTA ATCATTCAGG CGTTCAATGA GTACCAGCTT TTGTGCGCCC TGCGGGAAGG GCCGTTTGGC GTGGCTGGAC TGAATGAGCG AATTGAGCAG TTTATGCAAC AGAAGCGCAA AATTCATCGT AATCCGCACT CTCGTTGGTA CGAAGGCCGA CCGGTGATGA TTGCCCGTAA TGACAGCGCG CTTGGGTTGT TTAATGGCGA TATCGGTATT GCGCTGGATC GCGGGCAGGG GACGCGCGTC TGGTTTGCGA TGCCGGACGG CAATATTAAG TCTGTGCAAC CGAGTCGCTT GCCAGAGCAC GAAACGACGT GGGCGATGAC GGTACATAAA TCGCAGGGAT CGGAGTTCGA CCATGCGGCG TTGATTTTAC CGAGCCAACG CACGCCAGTA GTAACACGAG AGCTGGTTTA CACTGCGGTG ACCCGCGCGC GTCGCCGTCT GTCGCTGTAT GCCGATGAGC GCATTTTAAG TGCGGCAATT GCCACGCGCA CCGAGCGGCG CAGCGGTCTG GCGGCGTTGT TTAGTTCACG GGGATAA
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Protein sequence | MKLQKQLLEA VEHKQLRPLD VQFALTVAGD EHPAVTLAAA LLSHDAGEGH VCLPLSRLEN NEASHPLLAT CVSEIGELQN WEECLLASQA VSRGDEPTPM ILCGDRLYLN RMWCNERTVA RFFNEVNHAI EVDEALLAQT LDKLFPVSDD INWQKVAAAV ALTRRISVIS GGPGTGKTTT VAKLLAALIQ MADGERCRIR LAAPTGKAAA RLTESLGKAL RQLPLTDEQK KRIPEDASTL HRLLGAQPGS QRLRHHAGNP LHLDVLVVDE ASMIDLPMMS RLIDALPDHA RVIFLGDRDQ LASVEAGAVL GDICAYANAG FTAERAGQLS RLTGTHIPSG TGTEAASLRD SLCLLQKSYR FGSDSGIGQL AAAINRGDKM AVKTVFQQDF TDIEKRLLQS GEDYIAMLEE ALSGYGRYLD LLQARAEPDL IIQAFNEYQL LCALREGPFG VAGLNERIEQ FMQQKRKIHR NPHSRWYEGR PVMIARNDSA LGLFNGDIGI ALDRGQGTRV WFAMPDGNIK SVQPSRLPEH ETTWAMTVHK SQGSEFDHAA LILPSQRTPV VTRELVYTAV TRARRRLSLY ADERILSAAI ATRTERRSGL AALFSSRG
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