Gene EcSMS35_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2966 
SymbolrecD 
ID6144600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3039266 
End bp3041092 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content55% 
IMG OID641617835 
Productexonuclease V subunit alpha 
Protein accessionYP_001744987 
Protein GI170683529 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01447] exodeoxyribonuclease V, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGC AAAAGCAATT ACTGGAAGCT GTGGAGCACA AACAGCTACG CCCGCTGGAC 
GTGCAGTTTG CCCTGACCGT GGCGGGAGAT GAACATCCTG CCGTCACCCT CGCGGCGGCA
CTGTTAAGTC ATGATGCCGG AGAGGGACAC GTTTGTTTGC CGCTTTCACG ACTGGAAAAT
AACGAGGCAT CGCATCCGCT GTTGGCGACC TGTGTCAGTG AAATCGGTGA GCTACAAAAT
TGGGAAGAAT GCTTGCTGGC TTCACAAGCG GTCAGCCGGG GAGATGAACC AACGCCGATG
ATCCTCTGTG GCGATCGTCT TTATTTGAAT CGCATGTGGT GTAACGAGCG CACAGTGGCA
CGCTTTTTCA ACGAAGTGAA TCATGCCATT GAGGTTGATG AAGCTCTACT GGCGCAAACC
CTGGACAAAC TTTTTCCAGT AAGCGATGAC ATTAACTGGC AAAAAGTGGC GGCGGCAGTG
GCGCTGACGC GGCGGATTTC GGTGATTTCC GGCGGTCCTG GCACCGGTAA AACGACCACC
GTAGCGAAGT TGCTGGCAGC CTTAATTCAA ATGGCCGACG GAGAACGCTG CCGTATCCGT
CTGGCTGCAC CAACGGGTAA AGCTGCCGCG CGCTTAACCG AATCTCTCGG CAAGGCTTTG
CGCCAGTTAC CGCTGACCGA TGAACAAAAG AAACGCATTC CGGAAGATGC CAGTACTTTG
CACCGATTGC TGGGCGCACA GCCGGGTAGC CAGCGTTTAC GTCATCATGC CGGTAACCCG
CTGCATCTTG ATGTGCTGGT AGTAGATGAA GCGTCAATGA TCGATCTGCC GATGATGTCG
AGACTGATAG ACGCCTTGCC CGATCATGCG CGAGTGATCT TTCTCGGCGA TCGTGATCAA
CTGGCCTCGG TTGAGGCTGG GGCTGTGCTG GGCGATATTT GTGCTTATGC CAATGCCGGC
TTTACCGCCG AGCGTGCCGG GCAGCTAAGC CGCCTGACGG GAACTCACAT TCCGTCAGGA
ACTGGCACAG AAGCGGCATC TTTGCGCGAC AGTCTCTGCC TGCTGCAAAA AAGCTATCGT
TTCGGCAGCG ATTCTGGCAT TGGTCAGTTA GCTGCGGCGA TTAACCGTGG TGATAAAATG
GCAGTGAAAA CCGTTTTTCA GCAGGATTTT ACTGATATCG AAAAACGGCT TTTACAGAGC
GGCGAAGATT ATATTGCGAT GCTTGAGGAA GCTCTTTCGG GTTACGGACG TTATCTGGAT
CTGCTGCAAG CGCGTGCCGA GCCGGATTTA ATCATTCAGG CGTTCAATGA GTACCAGCTT
TTGTGCGCCC TGCGGGAAGG GCCGTTTGGC GTGGCTGGAC TGAATGAGCG AATTGAGCAG
TTTATGCAAC AGAAGCGCAA AATTCATCGT AATCCGCACT CTCGTTGGTA CGAAGGCCGA
CCGGTGATGA TTGCCCGTAA TGACAGCGCG CTTGGGTTGT TTAATGGCGA TATCGGTATT
GCGCTGGATC GCGGGCAGGG GACGCGCGTC TGGTTTGCGA TGCCGGACGG CAATATTAAG
TCTGTGCAAC CGAGTCGCTT GCCAGAGCAC GAAACGACGT GGGCGATGAC GGTACATAAA
TCGCAGGGAT CGGAGTTCGA CCATGCGGCG TTGATTTTAC CGAGCCAACG CACGCCAGTA
GTAACACGAG AGCTGGTTTA CACTGCGGTG ACCCGCGCGC GTCGCCGTCT GTCGCTGTAT
GCCGATGAGC GCATTTTAAG TGCGGCAATT GCCACGCGCA CCGAGCGGCG CAGCGGTCTG
GCGGCGTTGT TTAGTTCACG GGGATAA
 
Protein sequence
MKLQKQLLEA VEHKQLRPLD VQFALTVAGD EHPAVTLAAA LLSHDAGEGH VCLPLSRLEN 
NEASHPLLAT CVSEIGELQN WEECLLASQA VSRGDEPTPM ILCGDRLYLN RMWCNERTVA
RFFNEVNHAI EVDEALLAQT LDKLFPVSDD INWQKVAAAV ALTRRISVIS GGPGTGKTTT
VAKLLAALIQ MADGERCRIR LAAPTGKAAA RLTESLGKAL RQLPLTDEQK KRIPEDASTL
HRLLGAQPGS QRLRHHAGNP LHLDVLVVDE ASMIDLPMMS RLIDALPDHA RVIFLGDRDQ
LASVEAGAVL GDICAYANAG FTAERAGQLS RLTGTHIPSG TGTEAASLRD SLCLLQKSYR
FGSDSGIGQL AAAINRGDKM AVKTVFQQDF TDIEKRLLQS GEDYIAMLEE ALSGYGRYLD
LLQARAEPDL IIQAFNEYQL LCALREGPFG VAGLNERIEQ FMQQKRKIHR NPHSRWYEGR
PVMIARNDSA LGLFNGDIGI ALDRGQGTRV WFAMPDGNIK SVQPSRLPEH ETTWAMTVHK
SQGSEFDHAA LILPSQRTPV VTRELVYTAV TRARRRLSLY ADERILSAAI ATRTERRSGL
AALFSSRG