| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2964 |
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| Symbol | amiC1 |
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| ID | 6145539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3036388 |
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| End bp | 3037641 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617833 |
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| Product | N-acetylmuramoyl-L-alanine amidase AmiC |
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| Protein accession | YP_001744985 |
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| Protein GI | 170681690 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGAT CCAACACTGC AATCAGCCGT CGTCGTTTAC TGCAAGGCGC GGGTGCCATG
TGGCTATTGA GCGTAAGTCA GGTCAGCCTG GCTGCGGTCA GCCAGGTCGT GGCGGTGCGC
GTCTGGCCTG CGTCCAGCTA CACCCGCGTG ACGGTAGAAT CTAATCGTCA GCTGAAATAT
AAGCAGTTCG CGTTGAGTAA TCCTGAACGC GTGGTGGTGG ATATCGAAGA TGTAAACCTG
AACTCGGTGC TCAAGGGGAT GGCTGCGCAA ATCCGCGCTG ACGACCCGTT CATCAAGTCG
GCGCGCGTCG GGCAATTTGA CCCGCAAACC GTACGTATGG TTTTTGAATT AAAGCAAAAC
GTAAAACCGC AGCTGTTTGC CCTTGCGCCG GTCGCCGGGT TTAAAGAGCG TCTGGTGATG
GATCTCTATC CTGCCAATGC ACAGGATATG CAGGACCCGC TGCTGGCGCT GCTGGAGGAT
TACAACAAAG GCGACCTCGA AAAGCAGGTG CCGCCAGCAC AAAGTGGTCC ACAACCGGGT
AAAGCTGGGC GGGATCGTCC GATTGTCATT ATGCTTGACC CTGGTCACGG TGGCGAAGAC
TCCGGTGCGG TGGGGAAATA CAAAACACGC GAAAAAGACG TAGTATTGCA AATAGCTCGC
CGTCTGCGCT CTCTGATCGA GAAAGAGGGC AATATGAAGG TGTACATGAC GCGCAATGAA
GACATCTTCA TTCCGTTGCA AGTGCGCGTA GCAAAAGCCC AGAAACAGCG TGCTGACTTG
TTTGTCTCTA TCCATGCCGA CGCCTTTACC AGTCGCCAGC CGAGCGGTTC CTCGGTGTTT
GCGCTCTCAA CCAAAGGCGC AACCAGTACT GCGGCAAAAT ATCTGGCACA AACCCAGAAC
GCCTCGGACT TGATTGGTGG CGTAAGCAAA AGCGGTGACC GCTATGTCGA CCACACTATG
TTCGATATGG TGCAGTCGCT GACCATTGCT GACAGCCTGA AGTTTGGTAA AGCGGTGCTG
AATAAGCTCG GTAAAATCAA CAAGCTGCAT AAAAATCAAG TTGAACAGGC CGGGTTTGCC
GTACTAAAGG CACCAGATAT TCCCTCCATT CTGGTCGAAA CGGCGTTTAT CAGTAACGTT
GAGGAAGAGC GTAAACTGAA AACGGCGACT TTCCAGCAGG AAGTTGCGGA GTCTATTCTT
GCGGGAATTA AAGCGTATTT TGCCGATGGG GCGACGCTGG CGAGAAGGGG ATAA
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| Protein sequence | MSGSNTAISR RRLLQGAGAM WLLSVSQVSL AAVSQVVAVR VWPASSYTRV TVESNRQLKY
KQFALSNPER VVVDIEDVNL NSVLKGMAAQ IRADDPFIKS ARVGQFDPQT VRMVFELKQN
VKPQLFALAP VAGFKERLVM DLYPANAQDM QDPLLALLED YNKGDLEKQV PPAQSGPQPG
KAGRDRPIVI MLDPGHGGED SGAVGKYKTR EKDVVLQIAR RLRSLIEKEG NMKVYMTRNE
DIFIPLQVRV AKAQKQRADL FVSIHADAFT SRQPSGSSVF ALSTKGATST AAKYLAQTQN
ASDLIGGVSK SGDRYVDHTM FDMVQSLTIA DSLKFGKAVL NKLGKINKLH KNQVEQAGFA
VLKAPDIPSI LVETAFISNV EEERKLKTAT FQQEVAESIL AGIKAYFADG ATLARRG
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