| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2959 |
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| Symbol | |
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| ID | 6143418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3031920 |
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| End bp | 3032516 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641617828 |
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| Product | KpsF/GutQ family sugar isomerase |
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| Protein accession | YP_001744980 |
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| Protein GI | 170680141 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.700248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAGCA CGGATCTTAT CCATCTCATT AAACATTTTA TGCGTAACGA ACATAAAGCA
GTTGAAGAAG TTATTGATTC CCCCCTTTCG GAGGTCGCAA ATTTAATTAA AGTATTACAG
TCTTGTCAGG GGAAAGTTGT TTTTATTGGT GTCGGTAAGT CCGGTATTAT TGCCCGAAAA
CTCGCCGCAA CATTTGCCAG CACTGGAACT CCCTCGTTTT TTGTTCACGG TACGGAAGCG
GTACACGGCG ACCTTGGAAT GGTGGCGAAA GACGATGTTG TTATTCTTAT TTCAAACAGT
GGTGAGACGG CGGAAATCCT GGCGACACTG CCTAGTCTGA AAAAAATGGG TAATTATTTG
ATCTCTTTTA CACGCAGTCA TCACTCATCG CTTGCGATAA GTTGTGATTT ATCCGTTGAA
ATTCCCGTAA AAAGTGAGGC GGATAATTTA GGTTTAGCGC CGTCATGCTC ATCAACAGTC
GTTCTGGTTG TTGGTGATGC GGTGGCGCTT GCGCTCTCCG AATTGAAAAA GTTTACTCGT
GCTGATTTCG GCTTATATCA TCCAGGAGGT GCGCTCGGTA TTAAAGCAAA CTCATAA
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| Protein sequence | MNSTDLIHLI KHFMRNEHKA VEEVIDSPLS EVANLIKVLQ SCQGKVVFIG VGKSGIIARK
LAATFASTGT PSFFVHGTEA VHGDLGMVAK DDVVILISNS GETAEILATL PSLKKMGNYL
ISFTRSHHSS LAISCDLSVE IPVKSEADNL GLAPSCSSTV VLVVGDAVAL ALSELKKFTR
ADFGLYHPGG ALGIKANS
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