| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2958 |
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| Symbol | |
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| ID | 6143708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3030901 |
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| End bp | 3031848 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641617827 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
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| Protein accession | YP_001744979 |
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| Protein GI | 170684118 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.405227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATG TTCTGGTCAC CGTCCCCAGC TTTTCAGCAC GCTGTGTTTC CGCCAGCAAG
TTGCTAAGAG AGAATAATTT TAATCTTATT ATTAAGAATA ATGTGGAGCA TCTGCTTAAA
TCAGAATCCA CTGCATTACG AGAATCTATT TGCGCGGTCA TCGCCGGAAA AGATTGTTAT
CAGGCGGACA CGCTATCATT GCTGTCTGGT GTGAAAATAA TATCGAGATT CGGGACGGGG
ATAGACAATA TTGATCTTCG TGCGGCACAG CAATCCGGTA TTGTTGTCAA TAATGCGGTT
GGGATTAATT CAAATGCGGT TGCGGAATTT ATCATTGGAC TTATCTTCGC GAGCATGAGA
AATATCCCCG GTAGCTATCA TGCGATGCAA AATGGTTATT GGGGCGAGTC GCATGGCTGC
GAGTTACAAG GTAAACGTAT TGGCCTGCTT GGCTACGGCA ATATTGGCAA AACACTGGCG
AAAAGGTTAT CTGGTTTTGA TGTTGAGCTT TTAGCTTTTG ACAAACAACC CGATTTCCAG
GCCGCAGGCA AAGATGGAGT TCAGTTCGTA TCAATTGAAG ATATCTTTAT GCAGTCTCAT
GTCATCATCG TTCTTTTGCC ATTTTCTCCG GAGCTGGAGA ACTTCATTAG TCATAAATAT
TTGTCGATGA TGCGCAATGG TGCTCTGATC ATCAACGCCG CAAGGGGAAA GTTGCTGGAT
GAGGGTGCTT TACTTCAGGT AATTGAAGAA CGAAATGTTT TTGCAGCACT GGATGTGTTT
AGCTCTGAAC CGCTAGCGCA ATTTAGCCCA TTGCTACATG CCAAGAATAT CATTACAACG
CCGCATATTG CGGCCGCCAC CGTTGAGTCA TACCAGCAAA CCGGGATATA CGTTGCCCAG
TCGATAATTG ATTACTTCGC AGGAAGGGAG ATAAAAAACG TGCTGTGA
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| Protein sequence | MKNVLVTVPS FSARCVSASK LLRENNFNLI IKNNVEHLLK SESTALRESI CAVIAGKDCY
QADTLSLLSG VKIISRFGTG IDNIDLRAAQ QSGIVVNNAV GINSNAVAEF IIGLIFASMR
NIPGSYHAMQ NGYWGESHGC ELQGKRIGLL GYGNIGKTLA KRLSGFDVEL LAFDKQPDFQ
AAGKDGVQFV SIEDIFMQSH VIIVLLPFSP ELENFISHKY LSMMRNGALI INAARGKLLD
EGALLQVIEE RNVFAALDVF SSEPLAQFSP LLHAKNIITT PHIAAATVES YQQTGIYVAQ
SIIDYFAGRE IKNVL
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