Gene EcSMS35_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2948 
Symbol 
ID6144984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3024535 
End bp3024930 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content54% 
IMG OID641617817 
Producthypothetical protein 
Protein accessionYP_001744972 
Protein GI170684153 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000825789 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC GTTTTATGCT GATTTTCGCC GCCATTAGCG GCTTCATTTT TGTGGCTCTG 
GGCGCTTTTG GCGCGCATGT GTTAAGTAAA ACCATGGGGG CCGTTGAGAT GGGCTGGATC
CAGACCGGCC TCGAATACCA GGCGTTTCAT ACGCTGGCGA TCTTAGGTCT GGCGGTGGCA
ATGCAGCGTC GCATCAGTAT CTGGTTTTAC TGGAGTAGCG TTTTCCTCGC GTTAGGCACG
GTGCTGTTCA GCGGCAGCCT TTATTGCCTG GCGCTGTCCC ATCTGCGTTT GTGGGCGTTT
GTCACACCGG TTGGCGGTGT GAGCTTCCTT GCGGGCTGGG CGTTAATGTT AGTTGGTGCT
ATCCGTTTAA AGCGCAAGGG CGTAAGTCAT GAATAA
 
Protein sequence
MTSRFMLIFA AISGFIFVAL GAFGAHVLSK TMGAVEMGWI QTGLEYQAFH TLAILGLAVA 
MQRRISIWFY WSSVFLALGT VLFSGSLYCL ALSHLRLWAF VTPVGGVSFL AGWALMLVGA
IRLKRKGVSH E