| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2945 |
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| Symbol | fucU |
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| ID | 6146362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3022187 |
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| End bp | 3022609 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641617814 |
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| Product | fucose operon protein FucU |
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| Protein accession | YP_001744969 |
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| Protein GI | 170683884 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4154] Fucose dissimilation pathway protein FucU |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00726769 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAAAA CAATTTCGCC GTTAATTTCT CCCGAACTAT TGAAAGTGCT GGCAGAGATG
GGACATGGAG ATGAAATTAT TTTTTCCGAT GCTCACTTTC CCGCCCATTC GATGGGACCG
CAGGTGATCC GCGCTGATGG CCTGTTGGTG AGTGACTTGC TCCAGGCGAT TATCCCGTTA
TTTGAACTGG ACAGTTATGC ACCGCCGCTG GTGATGATGG CGGCGGTAGA AGGTGACACT
CTCGATCCTG AAGTAGAACG ACGTTATCGT AATGCGCTTT CACTACAAGC CCCCTGTCCT
GACATCATCC GCATCAATCG TTTTGCGTTT TATGAACGGG CGCAAAAAGC CTTTGCGATC
GTTATCACAG GCGAACGAGC GAAGTACGGG AATATTCTTT TAAAAAAAGG GGTAACACCG
TAA
|
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| Protein sequence | MLKTISPLIS PELLKVLAEM GHGDEIIFSD AHFPAHSMGP QVIRADGLLV SDLLQAIIPL
FELDSYAPPL VMMAAVEGDT LDPEVERRYR NALSLQAPCP DIIRINRFAF YERAQKAFAI
VITGERAKYG NILLKKGVTP
|
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