Gene EcSMS35_2943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2943 
SymbolfucI 
ID6147383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3018883 
End bp3020658 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content55% 
IMG OID641617812 
ProductL-fucose isomerase 
Protein accessionYP_001744967 
Protein GI170682875 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2407] L-fucose isomerase and related proteins 
TIGRFAM ID[TIGR01089] L-fucose isomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.301551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCAGCTTACC GAAAATTGGT ATCCGCCCGG TTATTGACGG TCGTCGCATG 
GGTGTTCGTG AGTCGCTTGA AGAACAAACA ATGAATATGG CGAAAGCCAC GGCCGCACTG
CTGACCGAGA AACTGCGCCA TGCCTGTGGA GCTGCCGTCG AGTGTGTCAT TTCCGATACC
TGTATCGCGG GTATGGCTGA AGCCGCTGCT TGCGAAGAAA AATTCAGCAG TCAGAATGTA
GGCCTCACCA TTACGGTAAC CCCTTGCTGG TGCTATGGCA GTGAAACCAT CGACATGGAT
CCAACCCGCC CGAAAGCCAT TTGGGGCTTT AACGGCACCG AACGTCCCGG CGCTGTTTAC
CTGGCAGCGG CTCTGGCAGC TCACAGCCAG AAAGGCATCC CGGCATTCTC CATTTACGGT
CATGACGTTC AGGATGCCGA TGACACATCG ATTCCTGCTG ATGTTGAAGA AAAACTGCTG
CGCTTTGCCC GCGCCGGTTT GGCCGTCGCC AGCATGAAAG GTAAAAGCTA TCTGTCGCTG
GGCGGCGTTT CGATGGGTAT CGCCGGTTCT ATTGTTGATC ACAACTTCTT TGAATCCTGG
CTGGGAATGA AAGTCCAGGC GGTGGATATG ACCGAACTGC GTCGCCGTAT CGATCAGAAG
ATTTACGACG AAGCCGAACT GGAAATGGCG CTGGCCTGGG CTGATAAAAA CTTCCGTTAT
GGCGAAGATG AAAATAACAA ACAGTATCAA CGCAATGCCG AGCAAAGCCG CGCAGTTCTG
CGCGAAAGTT TACTGATGGC GATGTGTATC CGCGACATGA TGCAAGGCAA CAGCAAACTG
GCCGATATTG GTCGCGTGGA AGAATCACTT GGCTACAACG CCATCGCTGC GGGCTTCCAG
GGACAACGCC ACTGGACCGA TCAATATCCC AATGGTGACA CCGCCGAAGC GCTCCTCAAC
AGTTCATTTG ACTGGAATGG CGTGCGCGAA CCCTTTGTCG TGGCGACCGA AAACGACAGT
CTTAACGGCG TGGCAATGCT AATGGGTCAC CAACTCACCG GCACCGCTCA GGTATTTGCC
GATGTGCGTA CCTACTGGTC ACCAGAAGCA ATTGAGCGTG TAACGGGGCA TAAACTCGAT
GGACTGGCAG AACACGGCAT CATCCATTTG ATCAACTCCG GTTCTGCTGC GCTGGACGGT
TCCTGTAAAC AACGCGACAG CGAAGGTAAC CCGACGATGA AGCCGCACTG GGAAATCTCT
CAGCAAGAGG CTGACGCTTG CCTCGCCGCT ACCGAATGGT GCCCGGCGAT CCACGAATAC
TTCCGTGGCG GCGGTTACTC TTCCCGCTTC CTTACCGAAG GCGGCGTCCC GTTCACCATG
ACTCGTGTCA ACATCATCAA AGGCCTGGGA CCGGTACTGC AAATCGCGGA AGGCTGGAGC
GTGGAATTGC CGAAGGATGT GCATGACATC CTCAACAAAC GCACCAACTC AACCTGGCCA
ACCACCTGGT TTGCACCGCG CCTCACCGGT AAAGGGCCGT TTACGGATGT GTACTCGGTA
ATGGCGAACT GGGGCGCTAA CCACGGGGTT CTGACCATCG GCCACGTTGG CGCAGACTTT
ATCACTCTTG CCTCCATGCT GCGTATCCCG GTATGTATGC ACAACGTTGA AGAGACCAAA
GTGTATCGTC CTTCTGCCTG GGCCGCGCAC GGCATGGATA TTGAAGGCCA GGATTACCGC
GCTTGCCAGA ACTACGGCCC GTTGTACAAG CGTTAA
 
Protein sequence
MKKISLPKIG IRPVIDGRRM GVRESLEEQT MNMAKATAAL LTEKLRHACG AAVECVISDT 
CIAGMAEAAA CEEKFSSQNV GLTITVTPCW CYGSETIDMD PTRPKAIWGF NGTERPGAVY
LAAALAAHSQ KGIPAFSIYG HDVQDADDTS IPADVEEKLL RFARAGLAVA SMKGKSYLSL
GGVSMGIAGS IVDHNFFESW LGMKVQAVDM TELRRRIDQK IYDEAELEMA LAWADKNFRY
GEDENNKQYQ RNAEQSRAVL RESLLMAMCI RDMMQGNSKL ADIGRVEESL GYNAIAAGFQ
GQRHWTDQYP NGDTAEALLN SSFDWNGVRE PFVVATENDS LNGVAMLMGH QLTGTAQVFA
DVRTYWSPEA IERVTGHKLD GLAEHGIIHL INSGSAALDG SCKQRDSEGN PTMKPHWEIS
QQEADACLAA TEWCPAIHEY FRGGGYSSRF LTEGGVPFTM TRVNIIKGLG PVLQIAEGWS
VELPKDVHDI LNKRTNSTWP TTWFAPRLTG KGPFTDVYSV MANWGANHGV LTIGHVGADF
ITLASMLRIP VCMHNVEETK VYRPSAWAAH GMDIEGQDYR ACQNYGPLYK R