| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2925 |
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| Symbol | |
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| ID | 6145081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3001296 |
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| End bp | 3002636 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641617794 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_001744949 |
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| Protein GI | 170680334 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCTC AATTTTCGAC GCCTGTTGTT ACTGAAATGC AGGTCATCCC GGTGGCGGGC
CATGACAGTA TGCTGATGAA TCTGAGTGGT GCACACGCAC CGTTCTTCAC GCGTAATATT
GTGATTATCA AAGATAATTC TGGTCACACT GGGGTAGGGG AAATTCCCGG CGGCGAGAAA
ATCCGTAAAA CGCTGGAAGA TGCGATTCCG CTGGTGGTGG GTAAAACGCT GGGTGAATAC
AAAAACGTTC TGACGCTGGT GCGTAATACA TTTGCCGATC GTGATGCCGG CGGGCGCGGT
TTGCAGACAT TTGACCTGCG GACCACTATT CATGTGGTTA CCGGGATAGA AGCGGCAATG
CTGGATCTGC TGGGGCAGCA TCTGGGGGTT AACGTGGCAT CGCTGCTGGG CGATGGTCAA
CAGCGTAGCG AAGTCGAAAT GCTCGGTTAT CTGTTCTTCG TCGGTAATCG CAAAGCCACA
CCGCTGCCGT ATCAAAGCCA GCCGGATGAT CAATGTGACT GGTATCGCCT GCGTCACGAA
GAAGCGATGA CGCCGGATGC GGTGGTGCGC CTGGCGGAAG CGGCATATGA AAAATATGGC
TTCAACGATT TCAAACTGAA GGGCGGTGTA CTGGCCGGGG AAGAAGAAGC AGAGTCTATT
GTGGCACTGG CGCAACGCTT CCCACAGGCG CGTATTACCC TCGATCCTAA CGGTGCCTGG
TCGCTGAACG AAGCGATTAA AATTGGTACA TACCTGAAAG GTTCGCTGGC TTATGCAGAA
GATCCGTGTG GTGCGGAGCA AGGTTTCTCC GGGCGTGAAG TGATGGCAGA GTTCCGTCGC
GCGACTGGCC TGCCGACCGC AACCAATATG ATCGCCACCG ACTGGCGGCA GATGGGCCAT
ACGCTCTCCC TGCAATCCGT TGATATCCCG CTGGCGGATC CGCATTTCTG GACGATGCAA
GGTTCGGTAC GTGTGGCGCA AATGTGCCAT GAATTTGGCC TGACCTGGGG TTCACACTCT
AACAACCACT TCGATATTTC TCTGGCGATG TTTACCCATG TAGCCGCTGC TGCACCGGGT
AAAATTACTG CTATTGATAC GCACTGGATC TGGCAGGAAG GCAATCAGCG TCTGACCAAA
GAACCGTTTG AGATCAAAGG CGGGCTGGTA CAGGTGCCGC AAAAACCAGG ATTGGGCGTA
GAAATCGATA TGGATCAGGT GATGAAAGCC CACGAGCTGT ATCAGAAACA TGGGCTTGGT
GCGCGTGACG ATGCGATGGG AATGCAGTAC CTGATTCCTG GCTGGACGTT TGATAACAAG
CGCCCGTGCA TGGTGCGTTA A
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| Protein sequence | MSSQFSTPVV TEMQVIPVAG HDSMLMNLSG AHAPFFTRNI VIIKDNSGHT GVGEIPGGEK
IRKTLEDAIP LVVGKTLGEY KNVLTLVRNT FADRDAGGRG LQTFDLRTTI HVVTGIEAAM
LDLLGQHLGV NVASLLGDGQ QRSEVEMLGY LFFVGNRKAT PLPYQSQPDD QCDWYRLRHE
EAMTPDAVVR LAEAAYEKYG FNDFKLKGGV LAGEEEAESI VALAQRFPQA RITLDPNGAW
SLNEAIKIGT YLKGSLAYAE DPCGAEQGFS GREVMAEFRR ATGLPTATNM IATDWRQMGH
TLSLQSVDIP LADPHFWTMQ GSVRVAQMCH EFGLTWGSHS NNHFDISLAM FTHVAAAAPG
KITAIDTHWI WQEGNQRLTK EPFEIKGGLV QVPQKPGLGV EIDMDQVMKA HELYQKHGLG
ARDDAMGMQY LIPGWTFDNK RPCMVR
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