Gene EcSMS35_2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2920 
SymbolchpA 
ID6146305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2994008 
End bp2994343 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content48% 
IMG OID641617789 
Producttoxin ChpA 
Protein accessionYP_001744944 
Protein GI170683531 
COG category[T] Signal transduction mechanisms 
COG ID[COG2337] Growth inhibitor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000686349 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGCC GATACGTACC CGATACGGGC GATCTGATTT GGGTTGATTT TGACCCGACA 
AAAGGTAGCG AGCAAGCCGG ACATCGTCCG GCTGTTGTCC TGAGTCCGTT CATGTACAAC
AACAAAACAG GTATGTGTCT GTGTGTTCCT TGTACAACGC AATCAAAAGG ATATCCGTTC
GAAGTTGTTC TATCCGGTCA GGAACGTGAT GGCGTAGCGT TAGCTGATCA GGTAAAAAGT
ATCGCCTGGC GGGCAAGAGG AGCAACGAAG AAAGGAACAG TTGCCCCAGA GGAATTACAA
CTCATTAAAG CCAAAATTAA CGTGCTGATT GGGTAG
 
Protein sequence
MVSRYVPDTG DLIWVDFDPT KGSEQAGHRP AVVLSPFMYN NKTGMCLCVP CTTQSKGYPF 
EVVLSGQERD GVALADQVKS IAWRARGATK KGTVAPEELQ LIKAKINVLI G