| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2906 |
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| Symbol | scrY |
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| ID | 6146601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2978525 |
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| End bp | 2980042 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641617775 |
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| Product | sucrose porin ScrY |
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| Protein accession | YP_001744930 |
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| Protein GI | 170682892 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00076782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAA AAACAACTTT GGCAATGTTA ATTGCTTTGC TGACCGGTGC TACAACGGTA
CATGCGCAAA CGGATATTAG CAGTATCGAA TCTCGACTGG CGGCGTTGGA ACAACGTTTA
AAAAATGCGG AATCCCGCGC CCAGGCGGCA GAAGCAAGGG CCAAAACAGC TGAATTACAG
GTTCAGAAAC TGGCTGAAAC ACAACAACAA AATCAGCTAA CAACTCAAGA AGTAGCACAG
AGAACAGTTC AGCTCGAACA GAAATCCGCA GAAAACAGTG GTTTTGAGTT TCATGGCTAT
GCCCGTTCCG GGTTACTGAT GAATGATGCC GCTTCCAGTA GCAAAAGTGG GCCGTATCTG
ACTCCCGCAG GTGAAACTGG TGGAGCTGTT GGCCGTCTGG GAAATGAAGC CGATACCTAT
GTCGAGTTAA ATGTAGAACA TAAACAAACA CTAGATAACG GTGCGACCAC ACGCTTTAAA
GCAATGTTGG CTGACGGACA AAGAGATTAC AACGACTGGA CTGGCGGCTC CAGTAACCTG
AATATCCGAC AGGCTTTTGC CGAACTGGGC GCATTACCAA GTTTTACCGG AGCATTCAAA
GACAGTACTG TCTGGGCTGG TAAACGCTTT GATCGCGACA ATTTTGATAT TCACTGGTTA
GACTCCGATG TCGTATTTTT AGCGGGAACG GGCGGCGGTA TCTATGACGT AAAATGGAAC
GATACATTCC GCAGTAACTT TTCTCTCTAC GGACGTAATT TCGGCGATCT TGATGATATC
GACAATAACG TTCAGAACTA CATCCTCACC ATGAATCATT ATGCAGGCCC CTTCCAGTTG
ATGGTTAGCG GATTACGGGC AAAAGATAAT GATGATCGAA AAGATGCCAA TGGTGATCTC
ATTCAAACTG ATGCTGCAAA TACTGGCGTA CATGCGTTAG TTGGTCTGCA CAATGACACT
TTCTATGGCC TGCGTGAAGG GACGGCAAAA ACAGCACTGC TATATGGCCA TGGCCTGGGT
GCGGAAGTCA AAGGGATTGG CTCCGATGGC GCTCTGCTGT CTGAGGCGAA TACCTGGCGC
TTCGCATCTT ACGGCACAAC ACCTCTGGGA AGCGGTTGGT ATGTTGCGCC AGCAATTCTC
GCACAAAGCA GTAAAGATCG TTACGTCAAA GGCGATAGCT ACGAATGGGT GACCTTCAAT
ACACGTCTGA TCAAAGAGGT AACACAGAAT TTTGCTCTGG CCTTTGAGGG TAGCTATCAA
TATATGGATC TGAAGCCAAA GGGGTATCAA AACCACAACG CCGTAAACGG CAGCTTCTAT
AAACTCACCT TTGCTCCAAC TCTAAAAGCT AACGATATCA ATAATTTCTT TAGCCGTCCG
GAGCTTCGCC TGTTTGCCAC CTGGATGGAC TGGAGCAGCA AACTTGATGA TTTTGCCAGC
AATGACGCTT TCGGCAGCAG TGGTTTCAAT ACTGGTGGAG AGTGGAATTT TGGTGTCCAA
ATGGAAACCT GGTTTTAA
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| Protein sequence | MYKKTTLAML IALLTGATTV HAQTDISSIE SRLAALEQRL KNAESRAQAA EARAKTAELQ
VQKLAETQQQ NQLTTQEVAQ RTVQLEQKSA ENSGFEFHGY ARSGLLMNDA ASSSKSGPYL
TPAGETGGAV GRLGNEADTY VELNVEHKQT LDNGATTRFK AMLADGQRDY NDWTGGSSNL
NIRQAFAELG ALPSFTGAFK DSTVWAGKRF DRDNFDIHWL DSDVVFLAGT GGGIYDVKWN
DTFRSNFSLY GRNFGDLDDI DNNVQNYILT MNHYAGPFQL MVSGLRAKDN DDRKDANGDL
IQTDAANTGV HALVGLHNDT FYGLREGTAK TALLYGHGLG AEVKGIGSDG ALLSEANTWR
FASYGTTPLG SGWYVAPAIL AQSSKDRYVK GDSYEWVTFN TRLIKEVTQN FALAFEGSYQ
YMDLKPKGYQ NHNAVNGSFY KLTFAPTLKA NDINNFFSRP ELRLFATWMD WSSKLDDFAS
NDAFGSSGFN TGGEWNFGVQ METWF
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