| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2894 |
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| Symbol | queD |
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| ID | 6146953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2966117 |
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| End bp | 2966479 |
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| Gene Length | 363 bp |
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| Protein Length | 120 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641617763 |
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| Product | queuosine biosynthesis protein QueD |
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| Protein accession | YP_001744918 |
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| Protein GI | 170682185 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
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| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACCA CGTTATTTAA AGATTTCACC TTCGAAGCCG CTCACCGCTT ACCACACGTC
CCGGAAGGAC ATAAATGTGG TCGCCTGCAC GGGCATTCCT TTATGGTGCG ACTGGAAATT
ACCGGGGAAG TCGATCCGCA TACGGGCTGG ATTATCGATT TCGCTGAACT GAAAGCGGCG
TTTAAGCCAA CCTACGAGCG CCTCGATCAC CATTATCTCA ATGATATTCC AGGTCTGGAA
AACCCAACCA GCGAAGTTTT AGCAAAATGG ATTTGGGATC AGGTTAAACC CGTTGTGCCG
CTGTTAAGTG CGGTGATGGT AAAAGAAACC TGCACCGCAG GTTGTATCTA TCGCGGCGAA
TGA
|
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| Protein sequence | MSTTLFKDFT FEAAHRLPHV PEGHKCGRLH GHSFMVRLEI TGEVDPHTGW IIDFAELKAA
FKPTYERLDH HYLNDIPGLE NPTSEVLAKW IWDQVKPVVP LLSAVMVKET CTAGCIYRGE
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