| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2889 |
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| Symbol | cas3 |
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| ID | 6147428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2958168 |
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| End bp | 2960867 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641617758 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_001744913 |
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| Protein GI | 170680605 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0793506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAT ATCCTTTAAG TTTACTGAAG GATAAAAATA TTGTGACTTT TTTTGATTTC
TGGGGAAAAA CCCGACGCGG CGAGAAAGAC GGGGGCGACG ACTATCACCT TCTTTGCTGG
CATTCGCTGG ATGTAGCCGC GATGGGCTAT TTAATGGTTA AAAGCAATTG CTTCGGACTG
GCTGACTATT TTCGTCAATT AGGTTTCGCT GACACGGAGC AGGCAGCACA ATTTTTCGCC
TGGCTGCTGT GCTGGCACGA TATTGGAAAA TTTGCCCGCT CTTTTCAGCA ACTTTACCTG
CACCCACAAC TCAAGGTCCC GGAAGGCGCA AGAAAGAATT ACGAAAAGAT CTCTCATTCA
ACGCTGGGCT ACTGGTTGTG GAACCATTAT TTAAGTGAAT GTCAGGAGTT GCTTCCTTCA
TCTTCACTCT CTCCGCGCAA ACTTAAACGG GTGATGGAGA TGTGGATGCC CATGACTACC
GGGCATCATG GTCGACCCCC TGAGCGTATG GATGAACTGG ATAATTTTCT GCCTGAAGAC
AAAGGTGCCG CACGAGATTT TCTCCTTGCA ATCAAGGTAC TGTTTCCGCT CATAGAGATC
CCCACATTCT GGGATGATGA CGAGGGCGTT GAACTTATAA AACAACTTTC CTGGTATATC
TCTGCAACCG TCGTACTTGC AGACTGGACG GGATCGTCAA CGCGATATTT TCCACGCGTC
GCACAGACAA TGGATATTGA AGATTACTGG CAGAAAACTT TAGTTCAGGC TCAAAACGCC
TTAACCGTCT TTCCTCCAAA AGCAGAAAGC GCGCCTTTCA CCGGAATTAA TACGCTGTTT
CCTTTTATTG AGAATCCGAC ACCGCTACAG CAAAAGGTGC TGGATCTGGA TATCAGCCAG
CCGGGACCAC AGTTATTTAT TCTGGAGGAT GTAACCGGCG CAGGTAAAAC AGAAGCGGCG
CTTATCCTGG CGCACAGGTT GATGGCTGCG GGGAAAGCGC AGGGTTTGTT TTTTGGCCTG
CCAACAATGG CAACGGCCAA TGCCATGTAC GATCGACTGG TCAAAACCTG GCTTGCTTTC
TATTCGCCAG AGTCCCGCCC CAGCCTGGTG CTGGCACACA GTGCCCGAAC ATTAATGGAC
CGCTTTAATG AATCACTCTG GTCCGGTGAT TTAGTCGGGT CAGAAGAACC GGATGAACAA
ACGTTCAGTC AGGGATGTGC GGCCTGGTTT GCCGACAGTA ACAAGAAGGC GCTACTGGCT
GAAATTGGCG TCGGCACGCT GGATCAGGCG ATGATGGCTG TGATGCCGTT CAAACATAAT
AATCTGCGGC TTCTGGGACT GAGTAACAAA ATCCTGCTGG CTGATGAGAT CCATGCCTGT
GACGCTTACA TGTCATGCAT TCTTGAAGGG CTGATCGAGC GGCAGGCGCG TGGCGGAAAC
AGCGTCATTT TGCTTTCTGC CACGTTATCT CAACAGCAGC GCGACAAACT CGTTGCTGCC
TTTGCGCGTG GTATAGAGGG CCAGCAAGAA GCTCCGTTCC TGGAAAAGGA TGATTACCCC
TGGCTGACGC ACGTTACGAA ATCCGATGTG CATTCACACC GGGTAGCGAC GCGCAAAGAC
GTTGAGCGCA GCGTGAGTGT GGGTTGGCTT CATAGCGAAC AAGAGTGTAT TGCGCGTATC
GCATCGGCGG TAAGTCAGGG GAAATGTATC GCCTGGATCC GAAATTCTGT CGATGACGCC
ATCCAGGTTC ATCGTCAGTT ACTTGCCCGC GGCGTCATTC CTGCTTCCAG CCTTTCACTT
TTTCATAGCC GCTTTGCTTT TAGCGATCGC CAGCGAATTG AAACGGAGAC GCTGGCACGC
TTTGGTAAAG AAGACTGTTC ACAGCGTGCC GGAAAAGTCC TCATTTGTAC TCAAGTCCTG
GAGCAGAGCG TTGACTGCGA CCTGGACGAA ATGATTTCCG ACCTTGCCCC TGTTGATTTA
CTGATCCAGC GAGCAGGGCG ATTACAGCGA CATATCCGCG ATATGAATGG CCAGTTAAAG
CGTGACGGTA AAGACGAGCG TCACCCTCCT GAATTGCTGA TTCTGGCCCC CGTCTGGGAC
GACTCTCCGG GTGACGAATG GTTTGGCAGT GCCATGCGTA ACAGTGCATT TGTCTATCCC
GATCATGGGC GAATCTGGCT GACGCAGCGT GTGCTGCGTG AGCAAGGTGC TATTCAGATG
CCACACTCAG CCCGGCTTCT GATTGAATCA GTCTACGGTG AGGACGTAGT AATGCCGGAA
GGGTTTGCCC GCAGCGAGCA GGAGCAAGTG GGCAAATATT ACTGCGATCG CGCAATGGCT
AAAAAGTTTG TACTGAACTT CAGGCCCGGC TATGCCGCCA ATATCAACGA TTACCTCCCG
GAAAAACTGT CGACACGTCT GGCTGAAGAG TCTGTTTCCC TGTGGCTGGC TACCTGTATT
GACGGTGTGG TGAAGCCTTA TGCCACAGGT GCACACGCAT GGGAAATGAG CGTTGTCAGA
GTGCGCCGAA GCTGGTGGAA AAAACATCGG GATGAGTTTT CTTTACTGGA AGGGGATGCG
TTCAGGCAGT GGTGCGTTGA ACAGCGGCAT GATCCGGAGA TGGCAAACGT GATTTTAGTC
ACCGATGACG AAAGTTGTGG GTATTCGGCT ACGGAGGGAT TGATTGGCAA GGTTGGTTGA
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| Protein sequence | MRKYPLSLLK DKNIVTFFDF WGKTRRGEKD GGDDYHLLCW HSLDVAAMGY LMVKSNCFGL
ADYFRQLGFA DTEQAAQFFA WLLCWHDIGK FARSFQQLYL HPQLKVPEGA RKNYEKISHS
TLGYWLWNHY LSECQELLPS SSLSPRKLKR VMEMWMPMTT GHHGRPPERM DELDNFLPED
KGAARDFLLA IKVLFPLIEI PTFWDDDEGV ELIKQLSWYI SATVVLADWT GSSTRYFPRV
AQTMDIEDYW QKTLVQAQNA LTVFPPKAES APFTGINTLF PFIENPTPLQ QKVLDLDISQ
PGPQLFILED VTGAGKTEAA LILAHRLMAA GKAQGLFFGL PTMATANAMY DRLVKTWLAF
YSPESRPSLV LAHSARTLMD RFNESLWSGD LVGSEEPDEQ TFSQGCAAWF ADSNKKALLA
EIGVGTLDQA MMAVMPFKHN NLRLLGLSNK ILLADEIHAC DAYMSCILEG LIERQARGGN
SVILLSATLS QQQRDKLVAA FARGIEGQQE APFLEKDDYP WLTHVTKSDV HSHRVATRKD
VERSVSVGWL HSEQECIARI ASAVSQGKCI AWIRNSVDDA IQVHRQLLAR GVIPASSLSL
FHSRFAFSDR QRIETETLAR FGKEDCSQRA GKVLICTQVL EQSVDCDLDE MISDLAPVDL
LIQRAGRLQR HIRDMNGQLK RDGKDERHPP ELLILAPVWD DSPGDEWFGS AMRNSAFVYP
DHGRIWLTQR VLREQGAIQM PHSARLLIES VYGEDVVMPE GFARSEQEQV GKYYCDRAMA
KKFVLNFRPG YAANINDYLP EKLSTRLAEE SVSLWLATCI DGVVKPYATG AHAWEMSVVR
VRRSWWKKHR DEFSLLEGDA FRQWCVEQRH DPEMANVILV TDDESCGYSA TEGLIGKVG
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