| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2888 |
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| Symbol | cse1 |
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| ID | 6144590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2956508 |
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| End bp | 2958070 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641617757 |
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| Product | CRISPR-associated Cse1 family protein |
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| Protein accession | YP_001744912 |
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| Protein GI | 170683207 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.447574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCGT TTTCACTTCT GACAACCCCG TGGTTGCCTG TTCGTTTCAA AGACGGAACG
ACAGGCAAGC TGGCACCAGT CGATCTGGCT GATGAAAATG TTGTCGATAT CGCCGCACCG
CGAGCAGATT TACAAGGTGC GGCCTGGCAG TTTTTGCTGG GACTACTACA AACCAGCTTC
GCGCCAAAAG ATCATCGTCG TTGGGATGAT ATCTGGGAAG ACGGACTGGA AGCTGAAAAG
CTACGAGAAG CATTGCTGTC TTTAGAACAT GCTTTCCAGT TTGGGCCTGA TTCATCTTCA
TTTATGCAGG ATTTTGAGGC GCTCACGGGA GATAAAGTTC CGGTCGCTTC GCTACTGCCT
GAGATTCCCG GCTCTCAAAC GACGAAGTTT AATAAAGACC ATTTTATCAA GCGGGGTGTA
ACGGAATATC TGTGCCCCCA TTGCTTAGCA TTGGCCTTGT TCTCTTTACA GTTGAATGCA
CCCGCGGGCG GCAAAGGCTA TCGCACCGGT TTACGAGGCG GTGGGCCGAT GACGACTCTC
ATTGAATTAC AGGAATATCA GGGCAATCAA CAAACACCCT TGTGGCGCAA ACTGTGGCTC
AACGTGATGC CGCAGGATGA AGCCGACTTA CCGCTACCCA AAAAATTTGA CGATCTGATT
TTCCCCTGGC TAGGCCCGAC GCGTACCAGC GAACTGGTCG GTGCGGTGGT AACCCATGAT
CAGGTCAATA AACTCCAGGC GTACTGGGGA ATGCCGCGGC GTATACGTAT TGATTTTAAT
ACCACGACAG TCGGCAACTG CGATATTTGC GACGAGCAGA ACGACGCGCT CCTGAGCCTG
ATGACGACCA AAAATTATGG TGCCAATTAT GCCATGTGGC AGCATCCCTT AACGCCTTAC
CGTGTACCAC TTAAAGAGGG TGGCGAGTTT TACTCCGTTA AACCACAACC GGGCGGTTTA
ATCTGGCGCG ACTGGTTAGG CCTTATCGAA ACGGGTAAAT CAGAAAACAA TACGGAACTT
CCCGCGTTGG TGGTGAAACT CTTTAATGCC AGCAGTCTGA AACAGGCAAA AGTGGGCCTA
TGGGGATTTG GTTATGATTT TGACAACATG AAAGCGCGCT GTTGGTACGA ACACCATTTC
CCGCTACTGC TCAATAAAAA AGAAGGCCAG ATACCGAAGC TGCGGCTGGC TGCGCAAACG
GCTTCACGGA TTCTGAGTCT GTTACGGAGT GCATTGAAAG AAGCATGGTT CTCCGATCCA
AAAGGTGCAA GGGGTGATTT CAGTTTTGTG GATATCGACT TCTGGAACAA AACTCAGCAT
CGCTTCCTGA GGTTAGTGCG CCAAATTGAA GAAGGTCAGG ATGCGGATGA ATTACTCGGC
AAATGGCAAA AGGAAATGTG GTTATTCGCG CGTCAGGATT TTGACGAGCG TGTATTCACT
AATCCTTATG AGCCCGTTGA TTTGAAACGC GTCATGACCG CGCGCAAGAA ATATTTTACA
ACATCGGCGG AGAAGCAAAG TGCTAAAGCC GCCAGGGAGA AAAAGCAGGA GGCTGCTGAA
TGA
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| Protein sequence | MNSFSLLTTP WLPVRFKDGT TGKLAPVDLA DENVVDIAAP RADLQGAAWQ FLLGLLQTSF
APKDHRRWDD IWEDGLEAEK LREALLSLEH AFQFGPDSSS FMQDFEALTG DKVPVASLLP
EIPGSQTTKF NKDHFIKRGV TEYLCPHCLA LALFSLQLNA PAGGKGYRTG LRGGGPMTTL
IELQEYQGNQ QTPLWRKLWL NVMPQDEADL PLPKKFDDLI FPWLGPTRTS ELVGAVVTHD
QVNKLQAYWG MPRRIRIDFN TTTVGNCDIC DEQNDALLSL MTTKNYGANY AMWQHPLTPY
RVPLKEGGEF YSVKPQPGGL IWRDWLGLIE TGKSENNTEL PALVVKLFNA SSLKQAKVGL
WGFGYDFDNM KARCWYEHHF PLLLNKKEGQ IPKLRLAAQT ASRILSLLRS ALKEAWFSDP
KGARGDFSFV DIDFWNKTQH RFLRLVRQIE EGQDADELLG KWQKEMWLFA RQDFDERVFT
NPYEPVDLKR VMTARKKYFT TSAEKQSAKA AREKKQEAAE
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