Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2884 |
Symbol | cse3 |
ID | 6146023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2953516 |
End bp | 2954166 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641617753 |
Product | CRISPR-associated Cse3 family protein |
Protein accession | YP_001744908 |
Protein GI | 170681320 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.542217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCTCT CAAGAATAAC CTTACATACC GGCCAGCTTT CGCCTGCGCA GTTGCTGCAT CTGGTGGATC GCGGGGAATA TGTGATGCAT CAGTGGCTGT GGGATCTTTT TCCTGGCGGC AAAGAAAGGC AATTTCTTTA TCGTCGGGAA GAACTCCAGG GCGCGTTTCG CTTTTTTGTC CTGTCGCAGG AACGCCCGGC GGAAAGTGAA ACGTTCACCA TCGAATGCCG GTCATTTGCG CCTGAACTGC ATACCGGACA ATCCCTTTGT TTCAACCTGC GGGCGAATCC AACAGTCTGT AAAGCGGGTA AGCGCCACGA TCTGCTGATG GAGGCGAAAC GGCAGGTGAG GGGGCAGGCG GAAGGAAGAA ATGTCTGGTT GCATCAACAA CAGGCGGCGC TGGACTGGCT GGCAGCGCAG GGGGAGAGAA GCGGTTTTAC ACTGCTGGAT ACCTCGGTCG ATGCCTACCG ACAACAGCAA CTGCGGCGGG AAAACTCCCG GCAACTGATC CAGTTCAGTA GCGTGGATTA TACAGGGATG CTTACAGTCA CCGATCCAGG GTTATTTCTG CAACGTCTCT GCCTGGGGTA TGGCAAAAGC CGGGCGTTCG GCTGTGGTCT GATGTTAATC AAACCCGGAG CAGAGGCGTG A
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Protein sequence | MYLSRITLHT GQLSPAQLLH LVDRGEYVMH QWLWDLFPGG KERQFLYRRE ELQGAFRFFV LSQERPAESE TFTIECRSFA PELHTGQSLC FNLRANPTVC KAGKRHDLLM EAKRQVRGQA EGRNVWLHQQ QAALDWLAAQ GERSGFTLLD TSVDAYRQQQ LRRENSRQLI QFSSVDYTGM LTVTDPGLFL QRLCLGYGKS RAFGCGLMLI KPGAEA
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