| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2872 |
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| Symbol | ispD |
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| ID | 6144541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2944978 |
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| End bp | 2945688 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617741 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001744896 |
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| Protein GI | 170681257 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCA CTCATTTGGA TGTTTGCGCC GTGGTTCCGG CGGCCGGATT TGGCCGTCGA
ATGCAAACGG AATGTCCTAA GCAATATCTC TCAATCGGTA ATCAAACCAT TCTTGAACAC
TCGGTGCATG CGCTGCTGGC GCATCCCCGG GTGACACGTG TCGTCATTGC CATAAGTCCT
GGCGATAGCC GTTTTGCAAA ACTTCCTCTG GCGAATCATC CGCAAATCAC CGTTGTAGAT
GGCGGTGATG AGCGTGCCGA TTCCGTGCTG GCAGGTTTGA AAGCCGCTGG CGACGCGCAG
TGGGTATTGG TGCATGATGC CGCTCGTCCT TGTCTGCATC AGGATGACCT CGCGCGATTG
TTGGCGTTGA GCGAAACCAG CCGCACGGGA GGGATCCTCG CCGCACCAGT GCGCGATACG
ATGAAACGTG CCGAACCGGG CAAAAATGCC ATTGCTCATA CCGTTGATCG CAACGGCTTA
TGGCACGCGC TGACGCCGCA ATTTTTCCCT CGTGAGCTGT TACATGACTG TCTGACGCGT
GCTCTAAATG AAGGCGCGAC TATTACTGAC GAAGCCTCGG CGCTGGAATA TTGCGGATTT
CATCCGCAGT TGGTCGAAGG CCGCGCGGAT AACATTAAAG TCACGCGCCC GGAGGATTTG
GCGCTGGCCG AATTTTACCT CACCCGAACC ATCCATCAGG AGAATACATA A
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| Protein sequence | MATTHLDVCA VVPAAGFGRR MQTECPKQYL SIGNQTILEH SVHALLAHPR VTRVVIAISP
GDSRFAKLPL ANHPQITVVD GGDERADSVL AGLKAAGDAQ WVLVHDAARP CLHQDDLARL
LALSETSRTG GILAAPVRDT MKRAEPGKNA IAHTVDRNGL WHALTPQFFP RELLHDCLTR
ALNEGATITD EASALEYCGF HPQLVEGRAD NIKVTRPEDL ALAEFYLTRT IHQENT
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